(6 nodes) Rabaptin, and Kit signaling pathway network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB5A	RAB5A, member RAS oncogene family. (61 aa)
	LOC107577469	Rab5 GDP/GTP exchange factor-like isoform X1. (551 aa)
	ENSSGRP00000040142	RAB5A, member RAS oncogene family, b. (121 aa)
	Rabep1	LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1. (835 aa)
	ENSSGRP00000071444	annotation not available (85 aa)
	ENSSGRP00000080884	Rab GTPase-binding effector protein 1-like. (55 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000040142	ENSSGRP00000071444	ENSSGRP00000040142	ENSSGRP00000071444	RAB5A, member RAS oncogene family, b.	annotation not available	0.968
ENSSGRP00000040142	ENSSGRP00000080884	ENSSGRP00000040142	ENSSGRP00000080884	RAB5A, member RAS oncogene family, b.	Rab GTPase-binding effector protein 1-like.	0.834
ENSSGRP00000040142	LOC107577469	ENSSGRP00000040142	ENSSGRP00000028638	RAB5A, member RAS oncogene family, b.	Rab5 GDP/GTP exchange factor-like isoform X1.	0.968
ENSSGRP00000040142	Rabep1	ENSSGRP00000040142	ENSSGRP00000059729	RAB5A, member RAS oncogene family, b.	LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1.	0.834
ENSSGRP00000071444	ENSSGRP00000040142	ENSSGRP00000071444	ENSSGRP00000040142	annotation not available	RAB5A, member RAS oncogene family, b.	0.968
ENSSGRP00000071444	ENSSGRP00000080884	ENSSGRP00000071444	ENSSGRP00000080884	annotation not available	Rab GTPase-binding effector protein 1-like.	0.999
ENSSGRP00000071444	LOC107577469	ENSSGRP00000071444	ENSSGRP00000028638	annotation not available	Rab5 GDP/GTP exchange factor-like isoform X1.	0.683
ENSSGRP00000071444	RAB5A	ENSSGRP00000071444	ENSSGRP00000007538	annotation not available	RAB5A, member RAS oncogene family.	0.968
ENSSGRP00000071444	Rabep1	ENSSGRP00000071444	ENSSGRP00000059729	annotation not available	LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1.	0.999
ENSSGRP00000080884	ENSSGRP00000040142	ENSSGRP00000080884	ENSSGRP00000040142	Rab GTPase-binding effector protein 1-like.	RAB5A, member RAS oncogene family, b.	0.834
ENSSGRP00000080884	ENSSGRP00000071444	ENSSGRP00000080884	ENSSGRP00000071444	Rab GTPase-binding effector protein 1-like.	annotation not available	0.999
ENSSGRP00000080884	LOC107577469	ENSSGRP00000080884	ENSSGRP00000028638	Rab GTPase-binding effector protein 1-like.	Rab5 GDP/GTP exchange factor-like isoform X1.	0.999
ENSSGRP00000080884	RAB5A	ENSSGRP00000080884	ENSSGRP00000007538	Rab GTPase-binding effector protein 1-like.	RAB5A, member RAS oncogene family.	0.834
ENSSGRP00000080884	Rabep1	ENSSGRP00000080884	ENSSGRP00000059729	Rab GTPase-binding effector protein 1-like.	LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1.	0.901
LOC107577469	ENSSGRP00000040142	ENSSGRP00000028638	ENSSGRP00000040142	Rab5 GDP/GTP exchange factor-like isoform X1.	RAB5A, member RAS oncogene family, b.	0.968
LOC107577469	ENSSGRP00000071444	ENSSGRP00000028638	ENSSGRP00000071444	Rab5 GDP/GTP exchange factor-like isoform X1.	annotation not available	0.683
LOC107577469	ENSSGRP00000080884	ENSSGRP00000028638	ENSSGRP00000080884	Rab5 GDP/GTP exchange factor-like isoform X1.	Rab GTPase-binding effector protein 1-like.	0.999
LOC107577469	RAB5A	ENSSGRP00000028638	ENSSGRP00000007538	Rab5 GDP/GTP exchange factor-like isoform X1.	RAB5A, member RAS oncogene family.	0.968
LOC107577469	Rabep1	ENSSGRP00000028638	ENSSGRP00000059729	Rab5 GDP/GTP exchange factor-like isoform X1.	LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1.	0.999
RAB5A	ENSSGRP00000071444	ENSSGRP00000007538	ENSSGRP00000071444	RAB5A, member RAS oncogene family.	annotation not available	0.968