(20 nodes) Vesicle fusion to plasma membrane, and SNARE complex assembly network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000002909	Vesicle-associated membrane protein 2-like. (114 aa)
	ENSSGRP00000006835	annotation not available (353 aa)
	LOC107554313	Vesicle-associated membrane protein 2-like. (110 aa)
	LOC107569511	Probable vesicular acetylcholine transporter-B. (512 aa)
	CPLX1	Complexin-1-like. (119 aa)
	LOC107560302	Synaptotagmin-1-like isoform X1. (429 aa)
	ENSSGRP00000036972	Complexin-2-like. (147 aa)
	ENSSGRP00000040205	Syntaxin-binding protein 1. (591 aa)
	stx1b	Syntaxin 1B/2/3. (296 aa)
	LOC107587749	Synaptosomal-associated protein 25-like. (209 aa)
	LOC107560506	Synaptotagmin-2-like. (436 aa)
	LOC107589629	Synaptosomal-associated protein 25-B. (203 aa)
	LOC107599071	Synaptosomal-associated protein 25-A. (204 aa)
	Stx1a	Syntaxin-1A isoform X1. (303 aa)
	LOC107554065	Syntaxin-4-like isoform X1. (315 aa)
	SNAP25	Synaptosome associated protein 25. (187 aa)
	LOC107590640	Synaptotagmin-1-like isoform X1. (422 aa)
	ENSSGRP00000096372	Vesicle-associated membrane protein 2. (108 aa)
	ENSSGRP00000105331	Syntaxin-1B-like. (180 aa)
	ENSSGRP00000109869	Vesicle-associated membrane protein 2-like isoform X1. (136 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPLX1	ENSSGRP00000002909	ENSSGRP00000017356	ENSSGRP00000002909	Complexin-1-like.	Vesicle-associated membrane protein 2-like.	0.633
CPLX1	ENSSGRP00000006835	ENSSGRP00000017356	ENSSGRP00000006835	Complexin-1-like.	annotation not available	0.556
CPLX1	ENSSGRP00000040205	ENSSGRP00000017356	ENSSGRP00000040205	Complexin-1-like.	Syntaxin-binding protein 1.	0.512
CPLX1	ENSSGRP00000096372	ENSSGRP00000017356	ENSSGRP00000096372	Complexin-1-like.	Vesicle-associated membrane protein 2.	0.633
CPLX1	ENSSGRP00000105331	ENSSGRP00000017356	ENSSGRP00000105331	Complexin-1-like.	Syntaxin-1B-like.	0.639
CPLX1	ENSSGRP00000109869	ENSSGRP00000017356	ENSSGRP00000109869	Complexin-1-like.	Vesicle-associated membrane protein 2-like isoform X1.	0.633
CPLX1	LOC107554065	ENSSGRP00000017356	ENSSGRP00000073175	Complexin-1-like.	Syntaxin-4-like isoform X1.	0.639
CPLX1	LOC107554313	ENSSGRP00000017356	ENSSGRP00000009785	Complexin-1-like.	Vesicle-associated membrane protein 2-like.	0.633
CPLX1	LOC107560302	ENSSGRP00000017356	ENSSGRP00000026115	Complexin-1-like.	Synaptotagmin-1-like isoform X1.	0.556
CPLX1	LOC107560506	ENSSGRP00000017356	ENSSGRP00000048161	Complexin-1-like.	Synaptotagmin-2-like.	0.556
CPLX1	LOC107569511	ENSSGRP00000017356	ENSSGRP00000015316	Complexin-1-like.	Probable vesicular acetylcholine transporter-B.	0.454
CPLX1	LOC107587749	ENSSGRP00000017356	ENSSGRP00000041978	Complexin-1-like.	Synaptosomal-associated protein 25-like.	0.765
CPLX1	LOC107589629	ENSSGRP00000017356	ENSSGRP00000062098	Complexin-1-like.	Synaptosomal-associated protein 25-B.	0.831
CPLX1	LOC107590640	ENSSGRP00000017356	ENSSGRP00000083019	Complexin-1-like.	Synaptotagmin-1-like isoform X1.	0.556
CPLX1	LOC107599071	ENSSGRP00000017356	ENSSGRP00000067586	Complexin-1-like.	Synaptosomal-associated protein 25-A.	0.831
CPLX1	SNAP25	ENSSGRP00000017356	ENSSGRP00000082108	Complexin-1-like.	Synaptosome associated protein 25.	0.831
CPLX1	Stx1a	ENSSGRP00000017356	ENSSGRP00000071443	Complexin-1-like.	Syntaxin-1A isoform X1.	0.639
CPLX1	stx1b	ENSSGRP00000017356	ENSSGRP00000041141	Complexin-1-like.	Syntaxin 1B/2/3.	0.639
ENSSGRP00000002909	CPLX1	ENSSGRP00000002909	ENSSGRP00000017356	Vesicle-associated membrane protein 2-like.	Complexin-1-like.	0.633
ENSSGRP00000002909	ENSSGRP00000006835	ENSSGRP00000002909	ENSSGRP00000006835	Vesicle-associated membrane protein 2-like.	annotation not available	0.731