(17 nodes) TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway, and Response to magnesium ion network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107587796	Tumor necrosis factor receptor superfamily member 5-like isoform X1. (295 aa)
	LOC107587320	TNF receptor-associated factor 2-like. (574 aa)
	ENSSGRP00000001956	TNF superfamily member 12. (228 aa)
	ENSSGRP00000005120	annotation not available (203 aa)
	ENSSGRP00000007905	annotation not available (395 aa)
	LOC107560229	TNF receptor-associated factor 2-like. (571 aa)
	LOC107561312	Tumor necrosis factor ligand superfamily member 11-like. (260 aa)
	LOC107582292	Lymphotoxin alpha (TNF superfamily, member 1). (244 aa)
	LOC107599053	TNF receptor-associated factor 1-like. (552 aa)
	LOC107595139	Tumor necrosis factor receptor superfamily member 11A-like. (572 aa)
	ENSSGRP00000058448	Tumor necrosis factor receptor superfamily member 1B-like. (408 aa)
	ENSSGRP00000071557	Tumor necrosis factor receptor superfamily, member 11a, NFKB activator. (484 aa)
	LOC107597453	Lymphotoxin alpha (TNF superfamily, member 1). (228 aa)
	LOC107601304	Mitogen-activated protein kinase kinase kinase 14-like. (845 aa)
	ENSSGRP00000090941	TNF superfamily member 12. (237 aa)
	ENSSGRP00000094657	annotation not available (395 aa)
	LOC107590367	Mitogen-activated protein kinase kinase kinase 14-like isoform X1. (890 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000001956	ENSSGRP00000005120	ENSSGRP00000001956	ENSSGRP00000005120	TNF superfamily member 12.	annotation not available	0.786
ENSSGRP00000001956	ENSSGRP00000007905	ENSSGRP00000001956	ENSSGRP00000007905	TNF superfamily member 12.	annotation not available	0.481
ENSSGRP00000001956	ENSSGRP00000058448	ENSSGRP00000001956	ENSSGRP00000058448	TNF superfamily member 12.	Tumor necrosis factor receptor superfamily member 1B-like.	0.556
ENSSGRP00000001956	ENSSGRP00000071557	ENSSGRP00000001956	ENSSGRP00000071557	TNF superfamily member 12.	Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.	0.627
ENSSGRP00000001956	ENSSGRP00000094657	ENSSGRP00000001956	ENSSGRP00000094657	TNF superfamily member 12.	annotation not available	0.481
ENSSGRP00000001956	LOC107560229	ENSSGRP00000001956	ENSSGRP00000011934	TNF superfamily member 12.	TNF receptor-associated factor 2-like.	0.495
ENSSGRP00000001956	LOC107561312	ENSSGRP00000001956	ENSSGRP00000020150	TNF superfamily member 12.	Tumor necrosis factor ligand superfamily member 11-like.	0.786
ENSSGRP00000001956	LOC107582292	ENSSGRP00000001956	ENSSGRP00000034096	TNF superfamily member 12.	Lymphotoxin alpha (TNF superfamily, member 1).	0.740
ENSSGRP00000001956	LOC107587320	ENSSGRP00000001956	ENSSGRP00000001876	TNF superfamily member 12.	TNF receptor-associated factor 2-like.	0.495
ENSSGRP00000001956	LOC107587796	ENSSGRP00000001956	ENSSGRP00000000771	TNF superfamily member 12.	Tumor necrosis factor receptor superfamily member 5-like isoform X1.	0.706
ENSSGRP00000001956	LOC107590367	ENSSGRP00000001956	ENSSGRP00000100983	TNF superfamily member 12.	Mitogen-activated protein kinase kinase kinase 14-like isoform X1.	0.648
ENSSGRP00000001956	LOC107595139	ENSSGRP00000001956	ENSSGRP00000054824	TNF superfamily member 12.	Tumor necrosis factor receptor superfamily member 11A-like.	0.627
ENSSGRP00000001956	LOC107597453	ENSSGRP00000001956	ENSSGRP00000077041	TNF superfamily member 12.	Lymphotoxin alpha (TNF superfamily, member 1).	0.431
ENSSGRP00000001956	LOC107599053	ENSSGRP00000001956	ENSSGRP00000051595	TNF superfamily member 12.	TNF receptor-associated factor 1-like.	0.521
ENSSGRP00000001956	LOC107601304	ENSSGRP00000001956	ENSSGRP00000085301	TNF superfamily member 12.	Mitogen-activated protein kinase kinase kinase 14-like.	0.648
ENSSGRP00000005120	ENSSGRP00000001956	ENSSGRP00000005120	ENSSGRP00000001956	annotation not available	TNF superfamily member 12.	0.786
ENSSGRP00000005120	ENSSGRP00000007905	ENSSGRP00000005120	ENSSGRP00000007905	annotation not available	annotation not available	0.985
ENSSGRP00000005120	ENSSGRP00000058448	ENSSGRP00000005120	ENSSGRP00000058448	annotation not available	Tumor necrosis factor receptor superfamily member 1B-like.	0.757
ENSSGRP00000005120	ENSSGRP00000071557	ENSSGRP00000005120	ENSSGRP00000071557	annotation not available	Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.	0.987
ENSSGRP00000005120	ENSSGRP00000090941	ENSSGRP00000005120	ENSSGRP00000090941	annotation not available	TNF superfamily member 12.	0.786