(35 nodes) Mixed, incl. Josephin domain DUBs, and Ubiquitin activating enzyme activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107583536	Baculoviral IAP repeat-containing protein 6-like isoform X1. (4982 aa)
	LOC107567735	Ubiquitin-small subunit ribosomal protein S27Ae. (156 aa)
	LOC107599783	Ubiquitin-like protein 7 isoform X1. (270 aa)
	ENSSGRP00000004833	annotation not available (161 aa)
	ENSSGRP00000019475	AN1-type zinc finger and ubiquitin domain-containing protein 1. (576 aa)
	ENSSGRP00000034836	RING finger protein 223-like. (115 aa)
	ube2k	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2). (200 aa)
	ENSSGRP00000040275	annotation not available (112 aa)
	ENSSGRP00000044774	annotation not available (91 aa)
	LOC107572061	Ubiquitin-conjugating enzyme E2 variant 1. (163 aa)
	ENSSGRP00000060207	annotation not available (247 aa)
	ENSSGRP00000065295	E3 ubiquitin-protein ligase UBR2-like. (1648 aa)
	LOC107601260	E3 ubiquitin-protein ligase TRAF7 isoform X1. (701 aa)
	LOC107568662	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2). (200 aa)
	LOC107558416	Ubiquitin-like. (106 aa)
	ENSSGRP00000079987	Next to BRCA1 gene 1 protein-like. (896 aa)
	LOC107567735-2	ubiquitin-40S ribosomal protein S27a. (156 aa)
	ENSSGRP00000083184	Mindbomb E3 ubiquitin protein ligase 2. (810 aa)
	ENSSGRP00000083272	Ubiquitin A-52 residue ribosomal protein fusion product 1. (95 aa)
	ENSSGRP00000084766	E3 ubiquitin-protein ligase TRIP12-like. (1801 aa)
	Mib2	E3 ubiquitin-protein ligase MIB2 isoform X1. (792 aa)
	ENSSGRP00000089091	Polyubiquitin-B-like isoform X1. (307 aa)
	ENSSGRP00000092540	annotation not available (42 aa)
	ENSSGRP00000092559	RAD23 homolog A, nucleotide excision repair protein b. (282 aa)
	LOC107584539	Ubiquitin-conjugating enzyme E2 R2-like. (250 aa)
	LOC107553913	Ubiquitin-conjugating enzyme E2 D4-like. (168 aa)
	LOC107582507	AN1-type zinc finger and ubiquitin domain-containing protein 1. (671 aa)
	ubqln4	Ubiquilin-4. (600 aa)
	LOC107591547	Ubiquitin-activating enzyme E1-like protein 2. (1027 aa)
	ENSSGRP00000101413	Ubiquitin-like modifier-activating enzyme 1. (1003 aa)
	LOC107556945-2	Ubiquitin-conjugating enzyme E2 G1-like. (169 aa)
	ENSSGRP00000106616	annotation not available (91 aa)
	LOC107590399	E3 ubiquitin-protein ligase TRAF7-like. (673 aa)
	LOC107592173	Ubiquilin-4-like. (317 aa)
	ENSSGRP00000111487	Next to BRCA1 gene 1 protein-like isoform X1. (884 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004833	ENSSGRP00000019475	ENSSGRP00000004833	ENSSGRP00000019475	annotation not available	AN1-type zinc finger and ubiquitin domain-containing protein 1.	0.998
ENSSGRP00000004833	ENSSGRP00000034836	ENSSGRP00000004833	ENSSGRP00000034836	annotation not available	RING finger protein 223-like.	0.989
ENSSGRP00000004833	ENSSGRP00000040275	ENSSGRP00000004833	ENSSGRP00000040275	annotation not available	annotation not available	0.903
ENSSGRP00000004833	ENSSGRP00000044774	ENSSGRP00000004833	ENSSGRP00000044774	annotation not available	annotation not available	0.778
ENSSGRP00000004833	ENSSGRP00000060207	ENSSGRP00000004833	ENSSGRP00000060207	annotation not available	annotation not available	0.802
ENSSGRP00000004833	ENSSGRP00000065295	ENSSGRP00000004833	ENSSGRP00000065295	annotation not available	E3 ubiquitin-protein ligase UBR2-like.	0.723
ENSSGRP00000004833	ENSSGRP00000079987	ENSSGRP00000004833	ENSSGRP00000079987	annotation not available	Next to BRCA1 gene 1 protein-like.	0.998
ENSSGRP00000004833	ENSSGRP00000083184	ENSSGRP00000004833	ENSSGRP00000083184	annotation not available	Mindbomb E3 ubiquitin protein ligase 2.	0.964
ENSSGRP00000004833	ENSSGRP00000083272	ENSSGRP00000004833	ENSSGRP00000083272	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.996
ENSSGRP00000004833	ENSSGRP00000084766	ENSSGRP00000004833	ENSSGRP00000084766	annotation not available	E3 ubiquitin-protein ligase TRIP12-like.	0.912
ENSSGRP00000004833	ENSSGRP00000089091	ENSSGRP00000004833	ENSSGRP00000089091	annotation not available	Polyubiquitin-B-like isoform X1.	0.957
ENSSGRP00000004833	ENSSGRP00000092540	ENSSGRP00000004833	ENSSGRP00000092540	annotation not available	annotation not available	0.812
ENSSGRP00000004833	ENSSGRP00000092559	ENSSGRP00000004833	ENSSGRP00000092559	annotation not available	RAD23 homolog A, nucleotide excision repair protein b.	0.802
ENSSGRP00000004833	ENSSGRP00000101413	ENSSGRP00000004833	ENSSGRP00000101413	annotation not available	Ubiquitin-like modifier-activating enzyme 1.	0.903
ENSSGRP00000004833	ENSSGRP00000106616	ENSSGRP00000004833	ENSSGRP00000106616	annotation not available	annotation not available	0.996
ENSSGRP00000004833	ENSSGRP00000111487	ENSSGRP00000004833	ENSSGRP00000111487	annotation not available	Next to BRCA1 gene 1 protein-like isoform X1.	0.998
ENSSGRP00000004833	LOC107553913	ENSSGRP00000004833	ENSSGRP00000095408	annotation not available	Ubiquitin-conjugating enzyme E2 D4-like.	0.784
ENSSGRP00000004833	LOC107556945-2	ENSSGRP00000004833	ENSSGRP00000105747	annotation not available	Ubiquitin-conjugating enzyme E2 G1-like.	0.907
ENSSGRP00000004833	LOC107558416	ENSSGRP00000004833	ENSSGRP00000076172	annotation not available	Ubiquitin-like.	0.985
ENSSGRP00000004833	LOC107568662	ENSSGRP00000004833	ENSSGRP00000074919	annotation not available	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	0.930