(12 nodes) Mixed, incl. Metallochaperone-like domain, and AAA domain network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107567270	Protein lifeguard 4-like isoform X1. (236 aa)
	LOC107578388	Zinc finger MYM-type protein 4-like. (238 aa)
	LOC107566774	Zinc finger MYM-type protein 4-like. (1427 aa)
	ENSSGRP00000028433	G2/M-phase specific E3 ubiquitin protein ligase. (614 aa)
	LOC107561549	ATP-binding protein involved in chromosome partitioning. (327 aa)
	LOC107561538	Probable D-tyrosyl-tRNA(Tyr) deacylase 2. (168 aa)
	ENSSGRP00000053652	Nucleotide binding protein-like. (236 aa)
	LOC107583453	Zinc finger MYM-type protein 4-like. (1447 aa)
	sgsm3	Small G protein signaling modulator 3 isoform X1. (756 aa)
	LOC107587136	Protein lifeguard 4-like. (236 aa)
	ENSSGRP00000089568	annotation not available (1269 aa)
	ENSSGRP00000111156	Small G protein signaling modulator 3-like. (732 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000028433	LOC107561538	ENSSGRP00000028433	ENSSGRP00000053651	G2/M-phase specific E3 ubiquitin protein ligase.	Probable D-tyrosyl-tRNA(Tyr) deacylase 2.	0.608
ENSSGRP00000053652	ENSSGRP00000111156	ENSSGRP00000053652	ENSSGRP00000111156	Nucleotide binding protein-like.	Small G protein signaling modulator 3-like.	0.594
ENSSGRP00000053652	LOC107561538	ENSSGRP00000053652	ENSSGRP00000053651	Nucleotide binding protein-like.	Probable D-tyrosyl-tRNA(Tyr) deacylase 2.	0.655
ENSSGRP00000053652	sgsm3	ENSSGRP00000053652	ENSSGRP00000083793	Nucleotide binding protein-like.	Small G protein signaling modulator 3 isoform X1.	0.594
ENSSGRP00000089568	ENSSGRP00000111156	ENSSGRP00000089568	ENSSGRP00000111156	annotation not available	Small G protein signaling modulator 3-like.	0.451
ENSSGRP00000089568	sgsm3	ENSSGRP00000089568	ENSSGRP00000083793	annotation not available	Small G protein signaling modulator 3 isoform X1.	0.451
ENSSGRP00000111156	ENSSGRP00000053652	ENSSGRP00000111156	ENSSGRP00000053652	Small G protein signaling modulator 3-like.	Nucleotide binding protein-like.	0.594
ENSSGRP00000111156	ENSSGRP00000089568	ENSSGRP00000111156	ENSSGRP00000089568	Small G protein signaling modulator 3-like.	annotation not available	0.451
ENSSGRP00000111156	LOC107561549	ENSSGRP00000111156	ENSSGRP00000053650	Small G protein signaling modulator 3-like.	ATP-binding protein involved in chromosome partitioning.	0.594
ENSSGRP00000111156	LOC107566774	ENSSGRP00000111156	ENSSGRP00000012492	Small G protein signaling modulator 3-like.	Zinc finger MYM-type protein 4-like.	0.451
ENSSGRP00000111156	LOC107567270	ENSSGRP00000111156	ENSSGRP00000000934	Small G protein signaling modulator 3-like.	Protein lifeguard 4-like isoform X1.	0.447
ENSSGRP00000111156	LOC107578388	ENSSGRP00000111156	ENSSGRP00000011151	Small G protein signaling modulator 3-like.	Zinc finger MYM-type protein 4-like.	0.451
ENSSGRP00000111156	LOC107583453	ENSSGRP00000111156	ENSSGRP00000059392	Small G protein signaling modulator 3-like.	Zinc finger MYM-type protein 4-like.	0.451
ENSSGRP00000111156	LOC107587136	ENSSGRP00000111156	ENSSGRP00000086535	Small G protein signaling modulator 3-like.	Protein lifeguard 4-like.	0.447
LOC107561538	ENSSGRP00000028433	ENSSGRP00000053651	ENSSGRP00000028433	Probable D-tyrosyl-tRNA(Tyr) deacylase 2.	G2/M-phase specific E3 ubiquitin protein ligase.	0.608
LOC107561538	ENSSGRP00000053652	ENSSGRP00000053651	ENSSGRP00000053652	Probable D-tyrosyl-tRNA(Tyr) deacylase 2.	Nucleotide binding protein-like.	0.655
LOC107561538	LOC107561549	ENSSGRP00000053651	ENSSGRP00000053650	Probable D-tyrosyl-tRNA(Tyr) deacylase 2.	ATP-binding protein involved in chromosome partitioning.	0.655
LOC107561549	ENSSGRP00000111156	ENSSGRP00000053650	ENSSGRP00000111156	ATP-binding protein involved in chromosome partitioning.	Small G protein signaling modulator 3-like.	0.594
LOC107561549	LOC107561538	ENSSGRP00000053650	ENSSGRP00000053651	ATP-binding protein involved in chromosome partitioning.	Probable D-tyrosyl-tRNA(Tyr) deacylase 2.	0.655
LOC107561549	sgsm3	ENSSGRP00000053650	ENSSGRP00000083793	ATP-binding protein involved in chromosome partitioning.	Small G protein signaling modulator 3 isoform X1.	0.594