(29 nodes) Mostly uncharacterized, incl. Extrinsic component of mitochondrial inner membrane, and Negative regulation of osteoclast differentiation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000001531	annotation not available (417 aa)
	ENSSGRP00000009758	Transmembrane protein 88-like. (215 aa)
	LOC107585845	Transmembrane protein 47-like isoform X1. (184 aa)
	ENSSGRP00000021657	annotation not available (1244 aa)
	LOC107548625	Transmembrane protein 47. (184 aa)
	ankrd37	Ankyrin repeat domain-containing protein 37. (130 aa)
	LOC107581589	Transmembrane protein 94-like. (1361 aa)
	ENSSGRP00000035683	Transmembrane protein 178A-like. (301 aa)
	LOC107556664	Putative protein MSS51 homolog, mitochondrial. (378 aa)
	C2CD4C	C2 calcium-dependent domain-containing protein 4C-like. (421 aa)
	ENSSGRP00000044777	Transmembrane protein 94-like isoform X1. (1355 aa)
	ENSSGRP00000046622	ETS oncogene family protein FEV. (235 aa)
	Kbtbd2	Kelch repeat and BTB domain-containing protein 2. (631 aa)
	LOC107586464	C2 calcium-dependent domain-containing protein 4C-like. (432 aa)
	LOC107591350	Death-associated protein kinase 3-like. (455 aa)
	LOC107562104	ETS oncogene family protein FEV. (235 aa)
	ENSSGRP00000076568	annotation not available (144 aa)
	ENSSGRP00000076796	annotation not available (290 aa)
	ENSSGRP00000077803	LOW QUALITY PROTEIN: transmembrane protein 97-like. (177 aa)
	ENSSGRP00000081659	annotation not available (65 aa)
	ENSSGRP00000082828	Transmembrane protein 88 b. (226 aa)
	LOC107591509	Uncharacterized protein C9orf172-like. (788 aa)
	MSS51	Putative protein MSS51 homolog, mitochondrial. (416 aa)
	LOC107586221	Transmembrane protein 88-like. (220 aa)
	ENSSGRP00000098224	Chemokine-like receptor 1. (356 aa)
	ENSSGRP00000109576	Calcium channel, voltage-dependent, gamma subunit 6a. (253 aa)
	LOC107556025	Transmembrane protein 178A. (301 aa)
	ENSSGRP00000111307	Transmembrane protein 88-like. (168 aa)
	ENSSGRP00000111601	Importin-13-like. (948 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000009758	ENSSGRP00000035683	ENSSGRP00000009758	ENSSGRP00000035683	Transmembrane protein 88-like.	Transmembrane protein 178A-like.	0.497
ENSSGRP00000009758	ENSSGRP00000044777	ENSSGRP00000009758	ENSSGRP00000044777	Transmembrane protein 88-like.	Transmembrane protein 94-like isoform X1.	0.513
ENSSGRP00000009758	LOC107556025	ENSSGRP00000009758	ENSSGRP00000111206	Transmembrane protein 88-like.	Transmembrane protein 178A.	0.497
ENSSGRP00000009758	LOC107581589	ENSSGRP00000009758	ENSSGRP00000029052	Transmembrane protein 88-like.	Transmembrane protein 94-like.	0.513
ENSSGRP00000021657	LOC107556664	ENSSGRP00000021657	ENSSGRP00000042083	annotation not available	Putative protein MSS51 homolog, mitochondrial.	0.563
ENSSGRP00000021657	MSS51	ENSSGRP00000021657	ENSSGRP00000093114	annotation not available	Putative protein MSS51 homolog, mitochondrial.	0.563
ENSSGRP00000035683	ENSSGRP00000009758	ENSSGRP00000035683	ENSSGRP00000009758	Transmembrane protein 178A-like.	Transmembrane protein 88-like.	0.497
ENSSGRP00000035683	ENSSGRP00000044777	ENSSGRP00000035683	ENSSGRP00000044777	Transmembrane protein 178A-like.	Transmembrane protein 94-like isoform X1.	0.628
ENSSGRP00000035683	ENSSGRP00000077803	ENSSGRP00000035683	ENSSGRP00000077803	Transmembrane protein 178A-like.	LOW QUALITY PROTEIN: transmembrane protein 97-like.	0.616
ENSSGRP00000035683	ENSSGRP00000081659	ENSSGRP00000035683	ENSSGRP00000081659	Transmembrane protein 178A-like.	annotation not available	0.616
ENSSGRP00000035683	ENSSGRP00000082828	ENSSGRP00000035683	ENSSGRP00000082828	Transmembrane protein 178A-like.	Transmembrane protein 88 b.	0.454
ENSSGRP00000035683	ENSSGRP00000111307	ENSSGRP00000035683	ENSSGRP00000111307	Transmembrane protein 178A-like.	Transmembrane protein 88-like.	0.497
ENSSGRP00000035683	LOC107548625	ENSSGRP00000035683	ENSSGRP00000025114	Transmembrane protein 178A-like.	Transmembrane protein 47.	0.608
ENSSGRP00000035683	LOC107581589	ENSSGRP00000035683	ENSSGRP00000029052	Transmembrane protein 178A-like.	Transmembrane protein 94-like.	0.628
ENSSGRP00000035683	LOC107585845	ENSSGRP00000035683	ENSSGRP00000018428	Transmembrane protein 178A-like.	Transmembrane protein 47-like isoform X1.	0.608
ENSSGRP00000035683	LOC107586221	ENSSGRP00000035683	ENSSGRP00000096104	Transmembrane protein 178A-like.	Transmembrane protein 88-like.	0.497
ENSSGRP00000044777	ENSSGRP00000009758	ENSSGRP00000044777	ENSSGRP00000009758	Transmembrane protein 94-like isoform X1.	Transmembrane protein 88-like.	0.513
ENSSGRP00000044777	ENSSGRP00000035683	ENSSGRP00000044777	ENSSGRP00000035683	Transmembrane protein 94-like isoform X1.	Transmembrane protein 178A-like.	0.628
ENSSGRP00000044777	ENSSGRP00000077803	ENSSGRP00000044777	ENSSGRP00000077803	Transmembrane protein 94-like isoform X1.	LOW QUALITY PROTEIN: transmembrane protein 97-like.	0.522
ENSSGRP00000044777	ENSSGRP00000081659	ENSSGRP00000044777	ENSSGRP00000081659	Transmembrane protein 94-like isoform X1.	annotation not available	0.522