(14 nodes) Hemoglobin complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107584216	Hemoglobin subunit alpha-D-like. (141 aa)
	LOC107561453	Haptoglobin-like. (334 aa)
	ENSSGRP00000036193	Hemoglobin subunit alpha-1-like. (167 aa)
	ENSSGRP00000036262	annotation not available (186 aa)
	LOC107587924	Hemoglobin subunit beta-like. (148 aa)
	ENSSGRP00000056782	Hemoglobin subunit alpha-1-like. (143 aa)
	ENSSGRP00000069427	annotation not available (71 aa)
	ENSSGRP00000069428	Hemoglobin beta embryonic-3. (144 aa)
	LOC107594186	Hemoglobin subunit alpha-D-like. (141 aa)
	ENSSGRP00000087444	annotation not available (150 aa)
	LOC107596827	Hemoglobin embryonic subunit alpha-like. (143 aa)
	ENSSGRP00000087483	annotation not available (140 aa)
	ENSSGRP00000087485	Hemoglobin, alpha adult 2. (128 aa)
	ENSSGRP00000087486	Hemoglobin, beta adult 2. (137 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000036193	ENSSGRP00000036262	ENSSGRP00000036193	ENSSGRP00000036262	Hemoglobin subunit alpha-1-like.	annotation not available	0.961
ENSSGRP00000036193	ENSSGRP00000069427	ENSSGRP00000036193	ENSSGRP00000069427	Hemoglobin subunit alpha-1-like.	annotation not available	0.894
ENSSGRP00000036193	ENSSGRP00000069428	ENSSGRP00000036193	ENSSGRP00000069428	Hemoglobin subunit alpha-1-like.	Hemoglobin beta embryonic-3.	0.764
ENSSGRP00000036193	ENSSGRP00000087483	ENSSGRP00000036193	ENSSGRP00000087483	Hemoglobin subunit alpha-1-like.	annotation not available	0.733
ENSSGRP00000036193	ENSSGRP00000087486	ENSSGRP00000036193	ENSSGRP00000087486	Hemoglobin subunit alpha-1-like.	Hemoglobin, beta adult 2.	0.705
ENSSGRP00000036193	LOC107561453	ENSSGRP00000036193	ENSSGRP00000032727	Hemoglobin subunit alpha-1-like.	Haptoglobin-like.	0.877
ENSSGRP00000036193	LOC107587924	ENSSGRP00000036193	ENSSGRP00000036363	Hemoglobin subunit alpha-1-like.	Hemoglobin subunit beta-like.	0.729
ENSSGRP00000036262	ENSSGRP00000036193	ENSSGRP00000036262	ENSSGRP00000036193	annotation not available	Hemoglobin subunit alpha-1-like.	0.961
ENSSGRP00000036262	ENSSGRP00000056782	ENSSGRP00000036262	ENSSGRP00000056782	annotation not available	Hemoglobin subunit alpha-1-like.	0.959
ENSSGRP00000036262	ENSSGRP00000069427	ENSSGRP00000036262	ENSSGRP00000069427	annotation not available	annotation not available	0.543
ENSSGRP00000036262	ENSSGRP00000087444	ENSSGRP00000036262	ENSSGRP00000087444	annotation not available	annotation not available	0.955
ENSSGRP00000036262	ENSSGRP00000087485	ENSSGRP00000036262	ENSSGRP00000087485	annotation not available	Hemoglobin, alpha adult 2.	0.956
ENSSGRP00000036262	LOC107561453	ENSSGRP00000036262	ENSSGRP00000032727	annotation not available	Haptoglobin-like.	0.997
ENSSGRP00000036262	LOC107584216	ENSSGRP00000036262	ENSSGRP00000005344	annotation not available	Hemoglobin subunit alpha-D-like.	0.961
ENSSGRP00000036262	LOC107594186	ENSSGRP00000036262	ENSSGRP00000069429	annotation not available	Hemoglobin subunit alpha-D-like.	0.964
ENSSGRP00000036262	LOC107596827	ENSSGRP00000036262	ENSSGRP00000087456	annotation not available	Hemoglobin embryonic subunit alpha-like.	0.955
ENSSGRP00000056782	ENSSGRP00000036262	ENSSGRP00000056782	ENSSGRP00000036262	Hemoglobin subunit alpha-1-like.	annotation not available	0.959
ENSSGRP00000056782	ENSSGRP00000069427	ENSSGRP00000056782	ENSSGRP00000069427	Hemoglobin subunit alpha-1-like.	annotation not available	0.894
ENSSGRP00000056782	ENSSGRP00000069428	ENSSGRP00000056782	ENSSGRP00000069428	Hemoglobin subunit alpha-1-like.	Hemoglobin beta embryonic-3.	0.830
ENSSGRP00000056782	ENSSGRP00000087483	ENSSGRP00000056782	ENSSGRP00000087483	Hemoglobin subunit alpha-1-like.	annotation not available	0.737