(11 nodes) Mixed, incl. Negative regulation of growth rate, and Lipoma HMGIC fusion partner-like protein network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000000841	annotation not available (461 aa)
	ENSSGRP00000007301	annotation not available (224 aa)
	LOC107564058	Transmembrane protease serine 4-like. (460 aa)
	ENSSGRP00000017131	annotation not available (732 aa)
	ENSSGRP00000035880	Lipoma HMGIC fusion partner-like 3 protein. (232 aa)
	LOC107561486	Transmembrane protease serine 4-like isoform X1. (460 aa)
	ENSSGRP00000060052	annotation not available (544 aa)
	ENSSGRP00000064667	Lipoma HMGIC fusion partner-like 3 protein. (261 aa)
	ENSSGRP00000075754	Gamma-aminobutyric acid receptor subunit pi-like. (417 aa)
	LOC107568276	Extracellular calcium-sensing receptor-like. (858 aa)
	LOC107599230	Transmembrane protease serine 13-like isoform X1. (516 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000000841	ENSSGRP00000007301	ENSSGRP00000000841	ENSSGRP00000007301	annotation not available	annotation not available	0.435
ENSSGRP00000000841	ENSSGRP00000035880	ENSSGRP00000000841	ENSSGRP00000035880	annotation not available	Lipoma HMGIC fusion partner-like 3 protein.	0.435
ENSSGRP00000000841	ENSSGRP00000064667	ENSSGRP00000000841	ENSSGRP00000064667	annotation not available	Lipoma HMGIC fusion partner-like 3 protein.	0.435
ENSSGRP00000007301	ENSSGRP00000000841	ENSSGRP00000007301	ENSSGRP00000000841	annotation not available	annotation not available	0.435
ENSSGRP00000007301	ENSSGRP00000060052	ENSSGRP00000007301	ENSSGRP00000060052	annotation not available	annotation not available	0.435
ENSSGRP00000035880	ENSSGRP00000000841	ENSSGRP00000035880	ENSSGRP00000000841	Lipoma HMGIC fusion partner-like 3 protein.	annotation not available	0.435
ENSSGRP00000035880	ENSSGRP00000060052	ENSSGRP00000035880	ENSSGRP00000060052	Lipoma HMGIC fusion partner-like 3 protein.	annotation not available	0.435
ENSSGRP00000060052	ENSSGRP00000007301	ENSSGRP00000060052	ENSSGRP00000007301	annotation not available	annotation not available	0.435
ENSSGRP00000060052	ENSSGRP00000035880	ENSSGRP00000060052	ENSSGRP00000035880	annotation not available	Lipoma HMGIC fusion partner-like 3 protein.	0.435
ENSSGRP00000060052	ENSSGRP00000064667	ENSSGRP00000060052	ENSSGRP00000064667	annotation not available	Lipoma HMGIC fusion partner-like 3 protein.	0.435
ENSSGRP00000064667	ENSSGRP00000000841	ENSSGRP00000064667	ENSSGRP00000000841	Lipoma HMGIC fusion partner-like 3 protein.	annotation not available	0.435
ENSSGRP00000064667	ENSSGRP00000060052	ENSSGRP00000064667	ENSSGRP00000060052	Lipoma HMGIC fusion partner-like 3 protein.	annotation not available	0.435
LOC107561486	LOC107568276	ENSSGRP00000036780	ENSSGRP00000084544	Transmembrane protease serine 4-like isoform X1.	Extracellular calcium-sensing receptor-like.	0.550
LOC107564058	LOC107568276	ENSSGRP00000008986	ENSSGRP00000084544	Transmembrane protease serine 4-like.	Extracellular calcium-sensing receptor-like.	0.550
LOC107568276	LOC107561486	ENSSGRP00000084544	ENSSGRP00000036780	Extracellular calcium-sensing receptor-like.	Transmembrane protease serine 4-like isoform X1.	0.550
LOC107568276	LOC107564058	ENSSGRP00000084544	ENSSGRP00000008986	Extracellular calcium-sensing receptor-like.	Transmembrane protease serine 4-like.	0.550
LOC107568276	LOC107599230	ENSSGRP00000084544	ENSSGRP00000091699	Extracellular calcium-sensing receptor-like.	Transmembrane protease serine 13-like isoform X1.	0.644
LOC107599230	LOC107568276	ENSSGRP00000091699	ENSSGRP00000084544	Transmembrane protease serine 13-like isoform X1.	Extracellular calcium-sensing receptor-like.	0.644