(7 nodes) Mixed, incl. Cytosolic proteasome complex, and Nuclear proteasome complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107573823	26S proteasome non-ATPase regulatory subunit 3-like. (527 aa)
	psmd12	26S proteasome non-ATPase regulatory subunit 12 isoform X1. (476 aa)
	LOC107549540	26S protease regulatory subunit 10B. (396 aa)
	LOC107553010	26S proteasome non-ATPase regulatory subunit 7. (328 aa)
	ENSSGRP00000066810	Proteasome 26S subunit, ATPase 5. (371 aa)
	LOC107563735-2	26S proteasome non-ATPase regulatory subunit 14. (310 aa)
	ENSSGRP00000103292	Proteasome 26S subunit, ATPase 3. (374 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000066810	ENSSGRP00000103292	ENSSGRP00000066810	ENSSGRP00000103292	Proteasome 26S subunit, ATPase 5.	Proteasome 26S subunit, ATPase 3.	0.999
ENSSGRP00000066810	LOC107549540	ENSSGRP00000066810	ENSSGRP00000039557	Proteasome 26S subunit, ATPase 5.	26S protease regulatory subunit 10B.	0.998
ENSSGRP00000066810	LOC107553010	ENSSGRP00000066810	ENSSGRP00000052904	Proteasome 26S subunit, ATPase 5.	26S proteasome non-ATPase regulatory subunit 7.	0.999
ENSSGRP00000066810	LOC107563735-2	ENSSGRP00000066810	ENSSGRP00000103093	Proteasome 26S subunit, ATPase 5.	26S proteasome non-ATPase regulatory subunit 14.	0.999
ENSSGRP00000066810	LOC107573823	ENSSGRP00000066810	ENSSGRP00000033864	Proteasome 26S subunit, ATPase 5.	26S proteasome non-ATPase regulatory subunit 3-like.	0.999
ENSSGRP00000066810	psmd12	ENSSGRP00000066810	ENSSGRP00000034551	Proteasome 26S subunit, ATPase 5.	26S proteasome non-ATPase regulatory subunit 12 isoform X1.	0.999
ENSSGRP00000103292	ENSSGRP00000066810	ENSSGRP00000103292	ENSSGRP00000066810	Proteasome 26S subunit, ATPase 3.	Proteasome 26S subunit, ATPase 5.	0.999
ENSSGRP00000103292	LOC107549540	ENSSGRP00000103292	ENSSGRP00000039557	Proteasome 26S subunit, ATPase 3.	26S protease regulatory subunit 10B.	0.998
ENSSGRP00000103292	LOC107553010	ENSSGRP00000103292	ENSSGRP00000052904	Proteasome 26S subunit, ATPase 3.	26S proteasome non-ATPase regulatory subunit 7.	0.999
ENSSGRP00000103292	LOC107563735-2	ENSSGRP00000103292	ENSSGRP00000103093	Proteasome 26S subunit, ATPase 3.	26S proteasome non-ATPase regulatory subunit 14.	0.999
ENSSGRP00000103292	LOC107573823	ENSSGRP00000103292	ENSSGRP00000033864	Proteasome 26S subunit, ATPase 3.	26S proteasome non-ATPase regulatory subunit 3-like.	0.999
ENSSGRP00000103292	psmd12	ENSSGRP00000103292	ENSSGRP00000034551	Proteasome 26S subunit, ATPase 3.	26S proteasome non-ATPase regulatory subunit 12 isoform X1.	0.999
LOC107549540	ENSSGRP00000066810	ENSSGRP00000039557	ENSSGRP00000066810	26S protease regulatory subunit 10B.	Proteasome 26S subunit, ATPase 5.	0.998
LOC107549540	ENSSGRP00000103292	ENSSGRP00000039557	ENSSGRP00000103292	26S protease regulatory subunit 10B.	Proteasome 26S subunit, ATPase 3.	0.998
LOC107549540	LOC107553010	ENSSGRP00000039557	ENSSGRP00000052904	26S protease regulatory subunit 10B.	26S proteasome non-ATPase regulatory subunit 7.	0.998
LOC107549540	LOC107563735-2	ENSSGRP00000039557	ENSSGRP00000103093	26S protease regulatory subunit 10B.	26S proteasome non-ATPase regulatory subunit 14.	0.999
LOC107549540	LOC107573823	ENSSGRP00000039557	ENSSGRP00000033864	26S protease regulatory subunit 10B.	26S proteasome non-ATPase regulatory subunit 3-like.	0.998
LOC107549540	psmd12	ENSSGRP00000039557	ENSSGRP00000034551	26S protease regulatory subunit 10B.	26S proteasome non-ATPase regulatory subunit 12 isoform X1.	0.999
LOC107553010	ENSSGRP00000066810	ENSSGRP00000052904	ENSSGRP00000066810	26S proteasome non-ATPase regulatory subunit 7.	Proteasome 26S subunit, ATPase 5.	0.999
LOC107553010	ENSSGRP00000103292	ENSSGRP00000052904	ENSSGRP00000103292	26S proteasome non-ATPase regulatory subunit 7.	Proteasome 26S subunit, ATPase 3.	0.999