STRINGSTRING
LOC107564103 LOC107564103 LOC107564590 LOC107564590 LOC107582169 LOC107582169 LOC107582086 LOC107582086 LOC107588960 LOC107588960 ENSSGRP00000049681 ENSSGRP00000049681 LOC107549128 LOC107549128 LOC107599552 LOC107599552 ENSSGRP00000078331 ENSSGRP00000078331 LOC107596479 LOC107596479 ENSSGRP00000079108 ENSSGRP00000079108 ENSSGRP00000085777 ENSSGRP00000085777 ENSSGRP00000086239 ENSSGRP00000086239 apob apob LOC107565590 LOC107565590 LOC107557955 LOC107557955
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107564103Microsomal triglyceride transfer protein large subunit-like. (886 aa)
LOC107564590Apolipoprotein B-100-like. (2652 aa)
LOC107582169Apolipoprotein A-I-like isoform X1. (255 aa)
LOC107582086Apolipoprotein A-I-like. (255 aa)
LOC107588960Scavenger receptor class B member 1-like isoform X1. (497 aa)
ENSSGRP00000049681Apolipoprotein B-100-like. (563 aa)
LOC107549128Apolipoprotein B-100-like. (3758 aa)
LOC107599552Apolipoprotein Eb-like. (269 aa)
ENSSGRP00000078331Apolipoprotein B-100-like isoform X1. (3739 aa)
LOC107596479Apolipoprotein A-I-like. (255 aa)
ENSSGRP00000079108Apolipoprotein Eb-like. (184 aa)
ENSSGRP00000085777Lecithin-cholesterol acyltransferase. (393 aa)
ENSSGRP00000086239Scavenger receptor class B member 1-like. (514 aa)
apobApolipoprotein B-100. (4422 aa)
LOC107565590Apolipoprotein Eb-like. (269 aa)
LOC107557955Microsomal triglyceride transfer protein large subunit-like. (910 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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