(21 nodes) Mixed, incl. Dectin-2 family, and Granular component network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000000140	Macrophage mannose receptor 1-like. (176 aa)
	ENSSGRP00000008540	annotation not available (161 aa)
	ENSSGRP00000011841	C-type lectin domain family 3, member Bb. (151 aa)
	ENSSGRP00000011842	C-type lectin domain family 3, member Bb. (151 aa)
	ENSSGRP00000014716	annotation not available (153 aa)
	LOC107576740	Ladderlectin-like. (152 aa)
	ENSSGRP00000021405	annotation not available (156 aa)
	ENSSGRP00000021410	annotation not available (165 aa)
	ENSSGRP00000023609	annotation not available (327 aa)
	ENSSGRP00000030247	annotation not available (171 aa)
	ENSSGRP00000043714	annotation not available (163 aa)
	ENSSGRP00000051408	annotation not available (178 aa)
	ENSSGRP00000059565	annotation not available (153 aa)
	ENSSGRP00000059590	CD209 antigen-like protein 2. (169 aa)
	ENSSGRP00000072717	annotation not available (210 aa)
	ENSSGRP00000074288	annotation not available (237 aa)
	ENSSGRP00000074306	annotation not available (257 aa)
	ENSSGRP00000074308	C-type lectin domain family 4 member M. (158 aa)
	ENSSGRP00000100157	Galactose-specific lectin nattectin-like. (147 aa)
	ENSSGRP00000101832	annotation not available (151 aa)
	ENSSGRP00000105404	Galactose-specific lectin nattectin-like. (152 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000008540	ENSSGRP00000011841	ENSSGRP00000008540	ENSSGRP00000011841	annotation not available	C-type lectin domain family 3, member Bb.	0.400
ENSSGRP00000008540	ENSSGRP00000011842	ENSSGRP00000008540	ENSSGRP00000011842	annotation not available	C-type lectin domain family 3, member Bb.	0.433
ENSSGRP00000008540	ENSSGRP00000030247	ENSSGRP00000008540	ENSSGRP00000030247	annotation not available	annotation not available	0.441
ENSSGRP00000008540	ENSSGRP00000059590	ENSSGRP00000008540	ENSSGRP00000059590	annotation not available	CD209 antigen-like protein 2.	0.476
ENSSGRP00000011841	ENSSGRP00000008540	ENSSGRP00000011841	ENSSGRP00000008540	C-type lectin domain family 3, member Bb.	annotation not available	0.400
ENSSGRP00000011842	ENSSGRP00000008540	ENSSGRP00000011842	ENSSGRP00000008540	C-type lectin domain family 3, member Bb.	annotation not available	0.433
ENSSGRP00000023609	ENSSGRP00000059565	ENSSGRP00000023609	ENSSGRP00000059565	annotation not available	annotation not available	0.424
ENSSGRP00000030247	ENSSGRP00000008540	ENSSGRP00000030247	ENSSGRP00000008540	annotation not available	annotation not available	0.441
ENSSGRP00000030247	ENSSGRP00000072717	ENSSGRP00000030247	ENSSGRP00000072717	annotation not available	annotation not available	0.417
ENSSGRP00000030247	ENSSGRP00000074288	ENSSGRP00000030247	ENSSGRP00000074288	annotation not available	annotation not available	0.419
ENSSGRP00000059565	ENSSGRP00000023609	ENSSGRP00000059565	ENSSGRP00000023609	annotation not available	annotation not available	0.424
ENSSGRP00000059590	ENSSGRP00000008540	ENSSGRP00000059590	ENSSGRP00000008540	CD209 antigen-like protein 2.	annotation not available	0.476
ENSSGRP00000059590	ENSSGRP00000072717	ENSSGRP00000059590	ENSSGRP00000072717	CD209 antigen-like protein 2.	annotation not available	0.475
ENSSGRP00000072717	ENSSGRP00000030247	ENSSGRP00000072717	ENSSGRP00000030247	annotation not available	annotation not available	0.417
ENSSGRP00000072717	ENSSGRP00000059590	ENSSGRP00000072717	ENSSGRP00000059590	annotation not available	CD209 antigen-like protein 2.	0.475
ENSSGRP00000074288	ENSSGRP00000030247	ENSSGRP00000074288	ENSSGRP00000030247	annotation not available	annotation not available	0.419
ENSSGRP00000074308	LOC107576740	ENSSGRP00000074308	ENSSGRP00000018104	C-type lectin domain family 4 member M.	Ladderlectin-like.	0.420
LOC107576740	ENSSGRP00000074308	ENSSGRP00000018104	ENSSGRP00000074308	Ladderlectin-like.	C-type lectin domain family 4 member M.	0.420