(23 nodes) Mixed, incl. TAFA family, and Neurexophilin network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000001922	annotation not available (90 aa)
	ENSSGRP00000002227	BMP/retinoic acid-inducible neural-specific protein 3-like. (649 aa)
	ENSSGRP00000004886	annotation not available (65 aa)
	LOC107572939	Neurexophilin-2-like. (265 aa)
	ENSSGRP00000010443	annotation not available (182 aa)
	ENSSGRP00000023909	annotation not available (62 aa)
	ENSSGRP00000035466	Protein FAM19A2-like. (165 aa)
	ENSSGRP00000050128	annotation not available (167 aa)
	ENSSGRP00000056911	Si:ch211-254n4.3. (186 aa)
	ENSSGRP00000057303	Zinc finger protein Rlf-like. (288 aa)
	ENSSGRP00000057833	annotation not available (84 aa)
	ENSSGRP00000059925	annotation not available (120 aa)
	ENSSGRP00000071408	annotation not available (121 aa)
	LOC107556821	Beta-crystallin A1-like. (206 aa)
	LOC107596455	Ictacalcin-like. (92 aa)
	ENSSGRP00000079825	annotation not available (126 aa)
	ENSSGRP00000085341	U3 small nucleolar RNA-associated protein 24. (154 aa)
	ENSSGRP00000091401	Von Willebrand factor C domain containing 2 like. (154 aa)
	LOC107551792	Neurexophilin-2-like. (265 aa)
	LOC107592525	Neurexophilin-1-like. (259 aa)
	ENSSGRP00000101767	Neurexophilin 2a. (251 aa)
	Fam19a2	Protein FAM19A2. (138 aa)
	ENSSGRP00000104854	Leucine-rich repeat and fibronectin type III domain-containing protein 1-like. (149 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000001922	ENSSGRP00000002227	ENSSGRP00000001922	ENSSGRP00000002227	annotation not available	BMP/retinoic acid-inducible neural-specific protein 3-like.	0.459
ENSSGRP00000001922	ENSSGRP00000010443	ENSSGRP00000001922	ENSSGRP00000010443	annotation not available	annotation not available	0.415
ENSSGRP00000001922	ENSSGRP00000023909	ENSSGRP00000001922	ENSSGRP00000023909	annotation not available	annotation not available	0.468
ENSSGRP00000001922	ENSSGRP00000035466	ENSSGRP00000001922	ENSSGRP00000035466	annotation not available	Protein FAM19A2-like.	0.504
ENSSGRP00000001922	ENSSGRP00000056911	ENSSGRP00000001922	ENSSGRP00000056911	annotation not available	Si:ch211-254n4.3.	0.497
ENSSGRP00000001922	ENSSGRP00000057303	ENSSGRP00000001922	ENSSGRP00000057303	annotation not available	Zinc finger protein Rlf-like.	0.435
ENSSGRP00000001922	ENSSGRP00000057833	ENSSGRP00000001922	ENSSGRP00000057833	annotation not available	annotation not available	0.507
ENSSGRP00000001922	ENSSGRP00000071408	ENSSGRP00000001922	ENSSGRP00000071408	annotation not available	annotation not available	0.504
ENSSGRP00000001922	ENSSGRP00000079825	ENSSGRP00000001922	ENSSGRP00000079825	annotation not available	annotation not available	0.514
ENSSGRP00000001922	ENSSGRP00000085341	ENSSGRP00000001922	ENSSGRP00000085341	annotation not available	U3 small nucleolar RNA-associated protein 24.	0.503
ENSSGRP00000001922	ENSSGRP00000091401	ENSSGRP00000001922	ENSSGRP00000091401	annotation not available	Von Willebrand factor C domain containing 2 like.	0.495
ENSSGRP00000001922	ENSSGRP00000101767	ENSSGRP00000001922	ENSSGRP00000101767	annotation not available	Neurexophilin 2a.	0.477
ENSSGRP00000001922	ENSSGRP00000104854	ENSSGRP00000001922	ENSSGRP00000104854	annotation not available	Leucine-rich repeat and fibronectin type III domain-containing protein 1-like.	0.444
ENSSGRP00000001922	Fam19a2	ENSSGRP00000001922	ENSSGRP00000103343	annotation not available	Protein FAM19A2.	0.508
ENSSGRP00000001922	LOC107551792	ENSSGRP00000001922	ENSSGRP00000096322	annotation not available	Neurexophilin-2-like.	0.451
ENSSGRP00000001922	LOC107572939	ENSSGRP00000001922	ENSSGRP00000009690	annotation not available	Neurexophilin-2-like.	0.453
ENSSGRP00000001922	LOC107592525	ENSSGRP00000001922	ENSSGRP00000097375	annotation not available	Neurexophilin-1-like.	0.478
ENSSGRP00000002227	ENSSGRP00000001922	ENSSGRP00000002227	ENSSGRP00000001922	BMP/retinoic acid-inducible neural-specific protein 3-like.	annotation not available	0.459
ENSSGRP00000002227	ENSSGRP00000023909	ENSSGRP00000002227	ENSSGRP00000023909	BMP/retinoic acid-inducible neural-specific protein 3-like.	annotation not available	0.412
ENSSGRP00000002227	ENSSGRP00000035466	ENSSGRP00000002227	ENSSGRP00000035466	BMP/retinoic acid-inducible neural-specific protein 3-like.	Protein FAM19A2-like.	0.427