(12 nodes) ESC/E(Z) complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	eed	Polycomb protein EED. (449 aa)
	ENSSGRP00000018095	Polycomb protein eed-like. (106 aa)
	ENSSGRP00000031529	Polycomb protein suz12-B. (675 aa)
	LOC107599052	PHD finger protein 19-like. (571 aa)
	ENSSGRP00000054172	PHD finger protein 19-like. (523 aa)
	ENSSGRP00000054173	LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EZH2-like. (735 aa)
	LOC107549206	Histone-lysine N-methyltransferase EZH2 isoform X1. (778 aa)
	LOC107595576	Protein Jumonji-like. (1183 aa)
	aebp2	Zinc finger protein AEBP2 isoform X1. (464 aa)
	ENSSGRP00000099740	Protein Jumonji-like isoform X1. (1185 aa)
	LOC107590398	Polycomb protein suz12-A. (686 aa)
	ENSSGRP00000111761	Zinc finger protein AEBP2-like. (330 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000018095	ENSSGRP00000031529	ENSSGRP00000018095	ENSSGRP00000031529	Polycomb protein eed-like.	Polycomb protein suz12-B.	0.980
ENSSGRP00000018095	ENSSGRP00000054172	ENSSGRP00000018095	ENSSGRP00000054172	Polycomb protein eed-like.	PHD finger protein 19-like.	0.891
ENSSGRP00000018095	ENSSGRP00000054173	ENSSGRP00000018095	ENSSGRP00000054173	Polycomb protein eed-like.	LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EZH2-like.	0.979
ENSSGRP00000018095	ENSSGRP00000099740	ENSSGRP00000018095	ENSSGRP00000099740	Polycomb protein eed-like.	Protein Jumonji-like isoform X1.	0.953
ENSSGRP00000018095	ENSSGRP00000111761	ENSSGRP00000018095	ENSSGRP00000111761	Polycomb protein eed-like.	Zinc finger protein AEBP2-like.	0.986
ENSSGRP00000018095	LOC107549206	ENSSGRP00000018095	ENSSGRP00000071263	Polycomb protein eed-like.	Histone-lysine N-methyltransferase EZH2 isoform X1.	0.979
ENSSGRP00000018095	LOC107590398	ENSSGRP00000018095	ENSSGRP00000106750	Polycomb protein eed-like.	Polycomb protein suz12-A.	0.980
ENSSGRP00000018095	LOC107595576	ENSSGRP00000018095	ENSSGRP00000080603	Polycomb protein eed-like.	Protein Jumonji-like.	0.953
ENSSGRP00000018095	LOC107599052	ENSSGRP00000018095	ENSSGRP00000051584	Polycomb protein eed-like.	PHD finger protein 19-like.	0.891
ENSSGRP00000018095	aebp2	ENSSGRP00000018095	ENSSGRP00000084693	Polycomb protein eed-like.	Zinc finger protein AEBP2 isoform X1.	0.986
ENSSGRP00000031529	ENSSGRP00000018095	ENSSGRP00000031529	ENSSGRP00000018095	Polycomb protein suz12-B.	Polycomb protein eed-like.	0.980
ENSSGRP00000031529	ENSSGRP00000054172	ENSSGRP00000031529	ENSSGRP00000054172	Polycomb protein suz12-B.	PHD finger protein 19-like.	0.822
ENSSGRP00000031529	ENSSGRP00000054173	ENSSGRP00000031529	ENSSGRP00000054173	Polycomb protein suz12-B.	LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EZH2-like.	0.959
ENSSGRP00000031529	ENSSGRP00000099740	ENSSGRP00000031529	ENSSGRP00000099740	Polycomb protein suz12-B.	Protein Jumonji-like isoform X1.	0.931
ENSSGRP00000031529	ENSSGRP00000111761	ENSSGRP00000031529	ENSSGRP00000111761	Polycomb protein suz12-B.	Zinc finger protein AEBP2-like.	0.964
ENSSGRP00000031529	LOC107549206	ENSSGRP00000031529	ENSSGRP00000071263	Polycomb protein suz12-B.	Histone-lysine N-methyltransferase EZH2 isoform X1.	0.959
ENSSGRP00000031529	LOC107595576	ENSSGRP00000031529	ENSSGRP00000080603	Polycomb protein suz12-B.	Protein Jumonji-like.	0.931
ENSSGRP00000031529	LOC107599052	ENSSGRP00000031529	ENSSGRP00000051584	Polycomb protein suz12-B.	PHD finger protein 19-like.	0.822
ENSSGRP00000031529	aebp2	ENSSGRP00000031529	ENSSGRP00000084693	Polycomb protein suz12-B.	Zinc finger protein AEBP2 isoform X1.	0.964
ENSSGRP00000031529	eed	ENSSGRP00000031529	ENSSGRP00000012645	Polycomb protein suz12-B.	Polycomb protein EED.	0.980