(7 nodes) Mixed, incl. Positive regulation of mesenchymal cell proliferation, and Embryonic digestive tract development network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000003605	annotation not available (92 aa)
	ENSSGRP00000004678	Homeobox protein zampogna-like. (141 aa)
	ENSSGRP00000019439	Homeobox protein BarH-like 1. (174 aa)
	barx1	Homeobox protein BarH-like 1. (248 aa)
	LOC107568673	Homeobox protein Nkx-3.2-like. (238 aa)
	LOC107556145	Forkhead box protein F2-like. (376 aa)
	LOC107555773	Forkhead box protein F2-like. (377 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003605	ENSSGRP00000019439	ENSSGRP00000003605	ENSSGRP00000019439	annotation not available	Homeobox protein BarH-like 1.	0.589
ENSSGRP00000003605	LOC107568673	ENSSGRP00000003605	ENSSGRP00000075081	annotation not available	Homeobox protein Nkx-3.2-like.	0.651
ENSSGRP00000003605	barx1	ENSSGRP00000003605	ENSSGRP00000031108	annotation not available	Homeobox protein BarH-like 1.	0.589
ENSSGRP00000004678	ENSSGRP00000019439	ENSSGRP00000004678	ENSSGRP00000019439	Homeobox protein zampogna-like.	Homeobox protein BarH-like 1.	0.466
ENSSGRP00000004678	LOC107555773	ENSSGRP00000004678	ENSSGRP00000093253	Homeobox protein zampogna-like.	Forkhead box protein F2-like.	0.412
ENSSGRP00000004678	LOC107556145	ENSSGRP00000004678	ENSSGRP00000084633	Homeobox protein zampogna-like.	Forkhead box protein F2-like.	0.412
ENSSGRP00000004678	barx1	ENSSGRP00000004678	ENSSGRP00000031108	Homeobox protein zampogna-like.	Homeobox protein BarH-like 1.	0.466
ENSSGRP00000019439	ENSSGRP00000003605	ENSSGRP00000019439	ENSSGRP00000003605	Homeobox protein BarH-like 1.	annotation not available	0.589
ENSSGRP00000019439	ENSSGRP00000004678	ENSSGRP00000019439	ENSSGRP00000004678	Homeobox protein BarH-like 1.	Homeobox protein zampogna-like.	0.466
ENSSGRP00000019439	LOC107568673	ENSSGRP00000019439	ENSSGRP00000075081	Homeobox protein BarH-like 1.	Homeobox protein Nkx-3.2-like.	0.648
LOC107555773	ENSSGRP00000004678	ENSSGRP00000093253	ENSSGRP00000004678	Forkhead box protein F2-like.	Homeobox protein zampogna-like.	0.412
LOC107555773	LOC107568673	ENSSGRP00000093253	ENSSGRP00000075081	Forkhead box protein F2-like.	Homeobox protein Nkx-3.2-like.	0.625
LOC107556145	ENSSGRP00000004678	ENSSGRP00000084633	ENSSGRP00000004678	Forkhead box protein F2-like.	Homeobox protein zampogna-like.	0.412
LOC107556145	LOC107568673	ENSSGRP00000084633	ENSSGRP00000075081	Forkhead box protein F2-like.	Homeobox protein Nkx-3.2-like.	0.625
LOC107568673	ENSSGRP00000003605	ENSSGRP00000075081	ENSSGRP00000003605	Homeobox protein Nkx-3.2-like.	annotation not available	0.651
LOC107568673	ENSSGRP00000019439	ENSSGRP00000075081	ENSSGRP00000019439	Homeobox protein Nkx-3.2-like.	Homeobox protein BarH-like 1.	0.648
LOC107568673	LOC107555773	ENSSGRP00000075081	ENSSGRP00000093253	Homeobox protein Nkx-3.2-like.	Forkhead box protein F2-like.	0.625
LOC107568673	LOC107556145	ENSSGRP00000075081	ENSSGRP00000084633	Homeobox protein Nkx-3.2-like.	Forkhead box protein F2-like.	0.625
LOC107568673	barx1	ENSSGRP00000075081	ENSSGRP00000031108	Homeobox protein Nkx-3.2-like.	Homeobox protein BarH-like 1.	0.648
barx1	ENSSGRP00000003605	ENSSGRP00000031108	ENSSGRP00000003605	Homeobox protein BarH-like 1.	annotation not available	0.589