(19 nodes) Mixed, incl. aminoacyl-tRNA hydrolase activity, and Transmembrane proteins 14C network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000004017	Serine-rich and transmembrane domain-containing protein 1-like. (94 aa)
	TMEM177	Transmembrane protein 177-like. (310 aa)
	ENSSGRP00000004906	Transmembrane protein 177-like. (275 aa)
	ENSSGRP00000006023	Transmembrane protein 14C-like. (99 aa)
	LOC107577367	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like. (109 aa)
	LOC107577367-2	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like. (109 aa)
	ENSSGRP00000024012	annotation not available (526 aa)
	LOC107598822	UDP-glucuronosyltransferase 2C1-like isoform X1. (247 aa)
	LOC107586347	Peptidyl-tRNA hydrolase, PTH2 family. (175 aa)
	LOC107597714	Transmembrane protein 14A-like. (99 aa)
	LOC107569769	Transmembrane protein 164-like. (313 aa)
	SERTM1	Serine-rich and transmembrane domain-containing protein 1. (109 aa)
	LOC107561967	Transmembrane protein 14C-like. (95 aa)
	LOC107550249	Transmembrane protein 205-like. (188 aa)
	LOC107568732	Cytochrome c oxidase assembly protein subunit 20. (111 aa)
	TMEM164	Transmembrane protein 164-like isoform X1. (313 aa)
	ENSSGRP00000092236	UDP glucuronosyltransferase 5 family, polypeptide A1. (516 aa)
	LOC107553204	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like. (104 aa)
	LOC107562898	Peptidyl-tRNA hydrolase, PTH2 family. (175 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004017	ENSSGRP00000006023	ENSSGRP00000004017	ENSSGRP00000006023	Serine-rich and transmembrane domain-containing protein 1-like.	Transmembrane protein 14C-like.	0.517
ENSSGRP00000004017	LOC107561967	ENSSGRP00000004017	ENSSGRP00000049393	Serine-rich and transmembrane domain-containing protein 1-like.	Transmembrane protein 14C-like.	0.517
ENSSGRP00000004017	LOC107569769	ENSSGRP00000004017	ENSSGRP00000040090	Serine-rich and transmembrane domain-containing protein 1-like.	Transmembrane protein 164-like.	0.621
ENSSGRP00000004017	LOC107597714	ENSSGRP00000004017	ENSSGRP00000035406	Serine-rich and transmembrane domain-containing protein 1-like.	Transmembrane protein 14A-like.	0.517
ENSSGRP00000004017	TMEM164	ENSSGRP00000004017	ENSSGRP00000082593	Serine-rich and transmembrane domain-containing protein 1-like.	Transmembrane protein 164-like isoform X1.	0.621
ENSSGRP00000006023	ENSSGRP00000004017	ENSSGRP00000006023	ENSSGRP00000004017	Transmembrane protein 14C-like.	Serine-rich and transmembrane domain-containing protein 1-like.	0.517
ENSSGRP00000006023	LOC107550249	ENSSGRP00000006023	ENSSGRP00000076843	Transmembrane protein 14C-like.	Transmembrane protein 205-like.	0.453
ENSSGRP00000006023	LOC107569769	ENSSGRP00000006023	ENSSGRP00000040090	Transmembrane protein 14C-like.	Transmembrane protein 164-like.	0.516
ENSSGRP00000006023	SERTM1	ENSSGRP00000006023	ENSSGRP00000044681	Transmembrane protein 14C-like.	Serine-rich and transmembrane domain-containing protein 1.	0.517
ENSSGRP00000006023	TMEM164	ENSSGRP00000006023	ENSSGRP00000082593	Transmembrane protein 14C-like.	Transmembrane protein 164-like isoform X1.	0.516
ENSSGRP00000092236	LOC107568732	ENSSGRP00000092236	ENSSGRP00000081036	UDP glucuronosyltransferase 5 family, polypeptide A1.	Cytochrome c oxidase assembly protein subunit 20.	0.408
LOC107550249	ENSSGRP00000006023	ENSSGRP00000076843	ENSSGRP00000006023	Transmembrane protein 205-like.	Transmembrane protein 14C-like.	0.453
LOC107550249	LOC107561967	ENSSGRP00000076843	ENSSGRP00000049393	Transmembrane protein 205-like.	Transmembrane protein 14C-like.	0.453
LOC107550249	LOC107597714	ENSSGRP00000076843	ENSSGRP00000035406	Transmembrane protein 205-like.	Transmembrane protein 14A-like.	0.453
LOC107553204	LOC107568732	ENSSGRP00000100472	ENSSGRP00000081036	Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like.	Cytochrome c oxidase assembly protein subunit 20.	0.596
LOC107561967	ENSSGRP00000004017	ENSSGRP00000049393	ENSSGRP00000004017	Transmembrane protein 14C-like.	Serine-rich and transmembrane domain-containing protein 1-like.	0.517
LOC107561967	LOC107550249	ENSSGRP00000049393	ENSSGRP00000076843	Transmembrane protein 14C-like.	Transmembrane protein 205-like.	0.453
LOC107561967	LOC107569769	ENSSGRP00000049393	ENSSGRP00000040090	Transmembrane protein 14C-like.	Transmembrane protein 164-like.	0.516
LOC107561967	SERTM1	ENSSGRP00000049393	ENSSGRP00000044681	Transmembrane protein 14C-like.	Serine-rich and transmembrane domain-containing protein 1.	0.517
LOC107561967	TMEM164	ENSSGRP00000049393	ENSSGRP00000082593	Transmembrane protein 14C-like.	Transmembrane protein 164-like isoform X1.	0.516