(5 nodes) G protein gamma subunit-like motifs network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000000780	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like. (70 aa)
	LOC107555383	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like. (72 aa)
	ENSSGRP00000009651	Guanine nucleotide-binding protein subunit alpha-12. (352 aa)
	LOC107551713	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like. (76 aa)
	LOC107564436	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like. (72 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000000780	ENSSGRP00000009651	ENSSGRP00000000780	ENSSGRP00000009651	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein subunit alpha-12.	0.940
ENSSGRP00000000780	LOC107551713	ENSSGRP00000000780	ENSSGRP00000086842	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.902
ENSSGRP00000000780	LOC107555383	ENSSGRP00000000780	ENSSGRP00000000871	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.902
ENSSGRP00000000780	LOC107564436	ENSSGRP00000000780	ENSSGRP00000094887	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.902
ENSSGRP00000009651	ENSSGRP00000000780	ENSSGRP00000009651	ENSSGRP00000000780	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.940
ENSSGRP00000009651	LOC107551713	ENSSGRP00000009651	ENSSGRP00000086842	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.963
ENSSGRP00000009651	LOC107555383	ENSSGRP00000009651	ENSSGRP00000000871	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.963
ENSSGRP00000009651	LOC107564436	ENSSGRP00000009651	ENSSGRP00000094887	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.963
LOC107551713	ENSSGRP00000000780	ENSSGRP00000086842	ENSSGRP00000000780	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.902
LOC107551713	ENSSGRP00000009651	ENSSGRP00000086842	ENSSGRP00000009651	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein subunit alpha-12.	0.963
LOC107551713	LOC107555383	ENSSGRP00000086842	ENSSGRP00000000871	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.901
LOC107551713	LOC107564436	ENSSGRP00000086842	ENSSGRP00000094887	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.901
LOC107555383	ENSSGRP00000000780	ENSSGRP00000000871	ENSSGRP00000000780	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.902
LOC107555383	ENSSGRP00000009651	ENSSGRP00000000871	ENSSGRP00000009651	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein subunit alpha-12.	0.963
LOC107555383	LOC107551713	ENSSGRP00000000871	ENSSGRP00000086842	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.901
LOC107555383	LOC107564436	ENSSGRP00000000871	ENSSGRP00000094887	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.901
LOC107564436	ENSSGRP00000000780	ENSSGRP00000094887	ENSSGRP00000000780	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.902
LOC107564436	ENSSGRP00000009651	ENSSGRP00000094887	ENSSGRP00000009651	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein subunit alpha-12.	0.963
LOC107564436	LOC107551713	ENSSGRP00000094887	ENSSGRP00000086842	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.901
LOC107564436	LOC107555383	ENSSGRP00000094887	ENSSGRP00000000871	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.	0.901