(11 nodes) Vasopressin-like receptors network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000006499	annotation not available (95 aa)
	AVPR1A	Arginine vasopressin receptor 1A. (387 aa)
	LOC107566857	Isotocin-neurophysin IT 1. (154 aa)
	ENSSGRP00000024962	Arginine vasopressin receptor 2a, duplicate b. (471 aa)
	LOC107568101	Vasotocin-neurophysin VT 1-like. (156 aa)
	LOC107555966	Isotocin receptor-like. (382 aa)
	LOC107592260	Arginine vasopressin receptor 1A. (398 aa)
	ENSSGRP00000056624	Arginine vasopressin receptor 1Aa. (336 aa)
	ENSSGRP00000071346	Isotocin receptor. (391 aa)
	ENSSGRP00000087881	Arginine vasopressin receptor 1A. (343 aa)
	LOC107597959	Isotocin-neurophysin IT 1-like. (154 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AVPR1A	ENSSGRP00000006499	ENSSGRP00000020244	ENSSGRP00000006499	Arginine vasopressin receptor 1A.	annotation not available	0.728
AVPR1A	ENSSGRP00000087881	ENSSGRP00000020244	ENSSGRP00000087881	Arginine vasopressin receptor 1A.	Arginine vasopressin receptor 1A.	0.948
AVPR1A	LOC107566857	ENSSGRP00000020244	ENSSGRP00000022802	Arginine vasopressin receptor 1A.	Isotocin-neurophysin IT 1.	0.815
AVPR1A	LOC107568101	ENSSGRP00000020244	ENSSGRP00000036369	Arginine vasopressin receptor 1A.	Vasotocin-neurophysin VT 1-like.	0.971
AVPR1A	LOC107592260	ENSSGRP00000020244	ENSSGRP00000053502	Arginine vasopressin receptor 1A.	Arginine vasopressin receptor 1A.	0.957
AVPR1A	LOC107597959	ENSSGRP00000020244	ENSSGRP00000088962	Arginine vasopressin receptor 1A.	Isotocin-neurophysin IT 1-like.	0.815
ENSSGRP00000006499	AVPR1A	ENSSGRP00000006499	ENSSGRP00000020244	annotation not available	Arginine vasopressin receptor 1A.	0.728
ENSSGRP00000006499	ENSSGRP00000024962	ENSSGRP00000006499	ENSSGRP00000024962	annotation not available	Arginine vasopressin receptor 2a, duplicate b.	0.733
ENSSGRP00000006499	ENSSGRP00000056624	ENSSGRP00000006499	ENSSGRP00000056624	annotation not available	Arginine vasopressin receptor 1Aa.	0.728
ENSSGRP00000006499	ENSSGRP00000071346	ENSSGRP00000006499	ENSSGRP00000071346	annotation not available	Isotocin receptor.	0.704
ENSSGRP00000006499	ENSSGRP00000087881	ENSSGRP00000006499	ENSSGRP00000087881	annotation not available	Arginine vasopressin receptor 1A.	0.767
ENSSGRP00000006499	LOC107555966	ENSSGRP00000006499	ENSSGRP00000040325	annotation not available	Isotocin receptor-like.	0.704
ENSSGRP00000006499	LOC107566857	ENSSGRP00000006499	ENSSGRP00000022802	annotation not available	Isotocin-neurophysin IT 1.	0.651
ENSSGRP00000006499	LOC107592260	ENSSGRP00000006499	ENSSGRP00000053502	annotation not available	Arginine vasopressin receptor 1A.	0.812
ENSSGRP00000006499	LOC107597959	ENSSGRP00000006499	ENSSGRP00000088962	annotation not available	Isotocin-neurophysin IT 1-like.	0.651
ENSSGRP00000024962	ENSSGRP00000006499	ENSSGRP00000024962	ENSSGRP00000006499	Arginine vasopressin receptor 2a, duplicate b.	annotation not available	0.733
ENSSGRP00000024962	LOC107566857	ENSSGRP00000024962	ENSSGRP00000022802	Arginine vasopressin receptor 2a, duplicate b.	Isotocin-neurophysin IT 1.	0.733
ENSSGRP00000024962	LOC107568101	ENSSGRP00000024962	ENSSGRP00000036369	Arginine vasopressin receptor 2a, duplicate b.	Vasotocin-neurophysin VT 1-like.	0.733
ENSSGRP00000024962	LOC107597959	ENSSGRP00000024962	ENSSGRP00000088962	Arginine vasopressin receptor 2a, duplicate b.	Isotocin-neurophysin IT 1-like.	0.733
ENSSGRP00000056624	ENSSGRP00000006499	ENSSGRP00000056624	ENSSGRP00000006499	Arginine vasopressin receptor 1Aa.	annotation not available	0.728