(20 nodes) Mixed, incl. Protein Family FAM60A, and Histone deacetylase complex subunit SAP130 C-terminus network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000011608	Protein FAM60A-like. (207 aa)
	LOC107576614	Phosphoinositide-3-kinase-interacting protein 1-like isoform X1. (260 aa)
	ENSSGRP00000019852	Mesoderm induction early response protein 3-like. (253 aa)
	ENSSGRP00000021888	annotation not available (562 aa)
	ENSSGRP00000027510	Protein FAM60A-like. (117 aa)
	ENSSGRP00000031457	BAH domain and coiled-coil containing 1b. (1856 aa)
	LOC107549002	Mesoderm induction early response protein 3-like isoform X1. (285 aa)
	ENSSGRP00000034824	Histone deacetylase complex subunit SAP130-like isoform X1. (1062 aa)
	ENSSGRP00000037942	Histone deacetylase complex subunit SAP130-like. (1039 aa)
	LOC107586002	Protein FAM60A-like. (254 aa)
	Sap130	Histone deacetylase complex subunit SAP130. (1050 aa)
	ENSSGRP00000064730	Si:ch73-174h16.4. (295 aa)
	ENSSGRP00000071893	annotation not available (735 aa)
	ENSSGRP00000077961	Protein THEMIS2-like. (538 aa)
	LOC107562797	Protein FAM60A-like. (250 aa)
	LOC107594804	Bromo adjacent homology domain-containing 1 protein-like isoform X1. (812 aa)
	Lrrc14b	Leucine-rich repeat-containing protein 14B isoform X1. (552 aa)
	ENSSGRP00000098197	Thymocyte selection associated family member 2. (553 aa)
	ENSSGRP00000105660	Histone deacetylase complex subunit SAP130-like. (1045 aa)
	LOC107595949	Phosphoinositide-3-kinase-interacting protein 1 isoform X1. (238 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000011608	ENSSGRP00000031457	ENSSGRP00000011608	ENSSGRP00000031457	Protein FAM60A-like.	BAH domain and coiled-coil containing 1b.	0.706
ENSSGRP00000011608	ENSSGRP00000034824	ENSSGRP00000011608	ENSSGRP00000034824	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130-like isoform X1.	0.796
ENSSGRP00000011608	ENSSGRP00000037942	ENSSGRP00000011608	ENSSGRP00000037942	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130-like.	0.796
ENSSGRP00000011608	ENSSGRP00000105660	ENSSGRP00000011608	ENSSGRP00000105660	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130-like.	0.733
ENSSGRP00000011608	Sap130	ENSSGRP00000011608	ENSSGRP00000043022	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130.	0.733
ENSSGRP00000021888	ENSSGRP00000077961	ENSSGRP00000021888	ENSSGRP00000077961	annotation not available	Protein THEMIS2-like.	0.418
ENSSGRP00000021888	ENSSGRP00000098197	ENSSGRP00000021888	ENSSGRP00000098197	annotation not available	Thymocyte selection associated family member 2.	0.418
ENSSGRP00000027510	ENSSGRP00000031457	ENSSGRP00000027510	ENSSGRP00000031457	Protein FAM60A-like.	BAH domain and coiled-coil containing 1b.	0.575
ENSSGRP00000027510	ENSSGRP00000034824	ENSSGRP00000027510	ENSSGRP00000034824	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130-like isoform X1.	0.761
ENSSGRP00000027510	ENSSGRP00000037942	ENSSGRP00000027510	ENSSGRP00000037942	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130-like.	0.761
ENSSGRP00000027510	ENSSGRP00000105660	ENSSGRP00000027510	ENSSGRP00000105660	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130-like.	0.679
ENSSGRP00000027510	Sap130	ENSSGRP00000027510	ENSSGRP00000043022	Protein FAM60A-like.	Histone deacetylase complex subunit SAP130.	0.679
ENSSGRP00000031457	ENSSGRP00000011608	ENSSGRP00000031457	ENSSGRP00000011608	BAH domain and coiled-coil containing 1b.	Protein FAM60A-like.	0.706
ENSSGRP00000031457	ENSSGRP00000027510	ENSSGRP00000031457	ENSSGRP00000027510	BAH domain and coiled-coil containing 1b.	Protein FAM60A-like.	0.575
ENSSGRP00000031457	LOC107562797	ENSSGRP00000031457	ENSSGRP00000084122	BAH domain and coiled-coil containing 1b.	Protein FAM60A-like.	0.575
ENSSGRP00000031457	LOC107586002	ENSSGRP00000031457	ENSSGRP00000042620	BAH domain and coiled-coil containing 1b.	Protein FAM60A-like.	0.706
ENSSGRP00000034824	ENSSGRP00000011608	ENSSGRP00000034824	ENSSGRP00000011608	Histone deacetylase complex subunit SAP130-like isoform X1.	Protein FAM60A-like.	0.796
ENSSGRP00000034824	ENSSGRP00000027510	ENSSGRP00000034824	ENSSGRP00000027510	Histone deacetylase complex subunit SAP130-like isoform X1.	Protein FAM60A-like.	0.761
ENSSGRP00000034824	LOC107562797	ENSSGRP00000034824	ENSSGRP00000084122	Histone deacetylase complex subunit SAP130-like isoform X1.	Protein FAM60A-like.	0.761
ENSSGRP00000034824	LOC107586002	ENSSGRP00000034824	ENSSGRP00000042620	Histone deacetylase complex subunit SAP130-like isoform X1.	Protein FAM60A-like.	0.796