(25 nodes) C-C chemokine binding, and Chemokine activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107596606	C-X-C chemokine receptor type 1-like. (342 aa)
	ENSSGRP00000000523	C-X-C chemokine receptor type 1-like. (370 aa)
	LOC107571721	C-X-C chemokine receptor type 7 (atypical chemokine receptor 3). (384 aa)
	LOC107578181	C-X-C chemokine receptor type 5-like. (375 aa)
	ENSSGRP00000011807	annotation not available (105 aa)
	LOC107575643	C-C motif chemokine 13-like. (103 aa)
	LOC107562973	Interleukin-8-like. (98 aa)
	CCR8	C-C chemokine receptor type 5-like. (351 aa)
	LOC107551206	C-C chemokine receptor type 4-like. (353 aa)
	LOC107553784	Interleukin-8-like. (99 aa)
	ENSSGRP00000039202	annotation not available (127 aa)
	ENSSGRP00000041871	C-X-C chemokine receptor type 1-like. (371 aa)
	LOC107584769	C-C chemokine receptor type 7-like. (374 aa)
	LOC107572720	C-X-C chemokine receptor type 5-like. (376 aa)
	LOC107599130	Monocyte chemotactic protein 1B-like. (121 aa)
	LOC107553525	Interleukin-8-like. (98 aa)
	LOC107599641	C-C motif chemokine 19-like. (119 aa)
	ENSSGRP00000087862	annotation not available (94 aa)
	ENSSGRP00000089497	annotation not available (104 aa)
	ENSSGRP00000089853	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1). (90 aa)
	ENSSGRP00000093790	annotation not available (84 aa)
	ENSSGRP00000096453	C-C chemokine receptor type 7-like. (414 aa)
	ENSSGRP00000105584	Interleukin-8-like. (95 aa)
	LOC107556439	C-X-C chemokine receptor type 4-like. (354 aa)
	LOC107581378	C-C chemokine receptor type 7-like. (372 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCR8	ENSSGRP00000000523	ENSSGRP00000027599	ENSSGRP00000000523	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 1-like.	0.527
CCR8	ENSSGRP00000011807	ENSSGRP00000027599	ENSSGRP00000011807	C-C chemokine receptor type 5-like.	annotation not available	0.565
CCR8	ENSSGRP00000039202	ENSSGRP00000027599	ENSSGRP00000039202	C-C chemokine receptor type 5-like.	annotation not available	0.555
CCR8	ENSSGRP00000041871	ENSSGRP00000027599	ENSSGRP00000041871	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 1-like.	0.527
CCR8	ENSSGRP00000087862	ENSSGRP00000027599	ENSSGRP00000087862	C-C chemokine receptor type 5-like.	annotation not available	0.972
CCR8	ENSSGRP00000089497	ENSSGRP00000027599	ENSSGRP00000089497	C-C chemokine receptor type 5-like.	annotation not available	0.873
CCR8	ENSSGRP00000089853	ENSSGRP00000027599	ENSSGRP00000089853	C-C chemokine receptor type 5-like.	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).	0.669
CCR8	ENSSGRP00000093790	ENSSGRP00000027599	ENSSGRP00000093790	C-C chemokine receptor type 5-like.	annotation not available	0.768
CCR8	ENSSGRP00000096453	ENSSGRP00000027599	ENSSGRP00000096453	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 7-like.	0.563
CCR8	ENSSGRP00000105584	ENSSGRP00000027599	ENSSGRP00000105584	C-C chemokine receptor type 5-like.	Interleukin-8-like.	0.609
CCR8	LOC107551206	ENSSGRP00000027599	ENSSGRP00000027600	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 4-like.	0.703
CCR8	LOC107553525	ENSSGRP00000027599	ENSSGRP00000086127	C-C chemokine receptor type 5-like.	Interleukin-8-like.	0.646
CCR8	LOC107553784	ENSSGRP00000027599	ENSSGRP00000028024	C-C chemokine receptor type 5-like.	Interleukin-8-like.	0.754
CCR8	LOC107556439	ENSSGRP00000027599	ENSSGRP00000106628	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 4-like.	0.719
CCR8	LOC107562973	ENSSGRP00000027599	ENSSGRP00000026338	C-C chemokine receptor type 5-like.	Interleukin-8-like.	0.609
CCR8	LOC107571721	ENSSGRP00000027599	ENSSGRP00000001265	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 7 (atypical chemokine receptor 3).	0.425
CCR8	LOC107572720	ENSSGRP00000027599	ENSSGRP00000062214	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 5-like.	0.583
CCR8	LOC107575643	ENSSGRP00000027599	ENSSGRP00000022924	C-C chemokine receptor type 5-like.	C-C motif chemokine 13-like.	0.768
CCR8	LOC107578181	ENSSGRP00000027599	ENSSGRP00000006296	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 5-like.	0.583
CCR8	LOC107581378	ENSSGRP00000027599	ENSSGRP00000108698	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 7-like.	0.700