(15 nodes) Dendritic cell chemotaxis, and C-C chemokine binding network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107578181	C-X-C chemokine receptor type 5-like. (375 aa)
	ENSSGRP00000011807	annotation not available (105 aa)
	LOC107575643	C-C motif chemokine 13-like. (103 aa)
	CCR8	C-C chemokine receptor type 5-like. (351 aa)
	LOC107551206	C-C chemokine receptor type 4-like. (353 aa)
	ENSSGRP00000039202	annotation not available (127 aa)
	LOC107584769	C-C chemokine receptor type 7-like. (374 aa)
	LOC107572720	C-X-C chemokine receptor type 5-like. (376 aa)
	LOC107599130	Monocyte chemotactic protein 1B-like. (121 aa)
	LOC107599641	C-C motif chemokine 19-like. (119 aa)
	ENSSGRP00000087862	annotation not available (94 aa)
	ENSSGRP00000089497	annotation not available (104 aa)
	ENSSGRP00000093790	annotation not available (84 aa)
	ENSSGRP00000096453	C-C chemokine receptor type 7-like. (414 aa)
	LOC107581378	C-C chemokine receptor type 7-like. (372 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCR8	ENSSGRP00000011807	ENSSGRP00000027599	ENSSGRP00000011807	C-C chemokine receptor type 5-like.	annotation not available	0.565
CCR8	ENSSGRP00000039202	ENSSGRP00000027599	ENSSGRP00000039202	C-C chemokine receptor type 5-like.	annotation not available	0.555
CCR8	ENSSGRP00000087862	ENSSGRP00000027599	ENSSGRP00000087862	C-C chemokine receptor type 5-like.	annotation not available	0.972
CCR8	ENSSGRP00000089497	ENSSGRP00000027599	ENSSGRP00000089497	C-C chemokine receptor type 5-like.	annotation not available	0.873
CCR8	ENSSGRP00000093790	ENSSGRP00000027599	ENSSGRP00000093790	C-C chemokine receptor type 5-like.	annotation not available	0.768
CCR8	ENSSGRP00000096453	ENSSGRP00000027599	ENSSGRP00000096453	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 7-like.	0.563
CCR8	LOC107551206	ENSSGRP00000027599	ENSSGRP00000027600	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 4-like.	0.703
CCR8	LOC107572720	ENSSGRP00000027599	ENSSGRP00000062214	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 5-like.	0.583
CCR8	LOC107575643	ENSSGRP00000027599	ENSSGRP00000022924	C-C chemokine receptor type 5-like.	C-C motif chemokine 13-like.	0.768
CCR8	LOC107578181	ENSSGRP00000027599	ENSSGRP00000006296	C-C chemokine receptor type 5-like.	C-X-C chemokine receptor type 5-like.	0.583
CCR8	LOC107581378	ENSSGRP00000027599	ENSSGRP00000108698	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 7-like.	0.700
CCR8	LOC107584769	ENSSGRP00000027599	ENSSGRP00000054039	C-C chemokine receptor type 5-like.	C-C chemokine receptor type 7-like.	0.700
CCR8	LOC107599130	ENSSGRP00000027599	ENSSGRP00000073456	C-C chemokine receptor type 5-like.	Monocyte chemotactic protein 1B-like.	0.673
CCR8	LOC107599641	ENSSGRP00000027599	ENSSGRP00000086428	C-C chemokine receptor type 5-like.	C-C motif chemokine 19-like.	0.673
ENSSGRP00000011807	CCR8	ENSSGRP00000011807	ENSSGRP00000027599	annotation not available	C-C chemokine receptor type 5-like.	0.565
ENSSGRP00000011807	ENSSGRP00000039202	ENSSGRP00000011807	ENSSGRP00000039202	annotation not available	annotation not available	0.639
ENSSGRP00000011807	ENSSGRP00000087862	ENSSGRP00000011807	ENSSGRP00000087862	annotation not available	annotation not available	0.988
ENSSGRP00000011807	ENSSGRP00000089497	ENSSGRP00000011807	ENSSGRP00000089497	annotation not available	annotation not available	0.540
ENSSGRP00000011807	ENSSGRP00000093790	ENSSGRP00000011807	ENSSGRP00000093790	annotation not available	annotation not available	0.626
ENSSGRP00000011807	ENSSGRP00000096453	ENSSGRP00000011807	ENSSGRP00000096453	annotation not available	C-C chemokine receptor type 7-like.	0.597