(12 nodes) Sulfation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107591081	Sulfotransferase family cytosolic 1B member 1-like. (306 aa)
	ENSSGRP00000002793	annotation not available (286 aa)
	ENSSGRP00000024618	Sulfotransferase family 1, cytosolic sulfotransferase 5. (290 aa)
	ENSSGRP00000043750	annotation not available (244 aa)
	ENSSGRP00000043751	annotation not available (247 aa)
	LOC107561909	Amine sulfotransferase-like isoform X1. (299 aa)
	LOC107600995	Amine sulfotransferase-like. (266 aa)
	ENSSGRP00000049785	annotation not available (318 aa)
	LOC107592236	Sulfotransferase 4A1-like. (284 aa)
	LOC107552400	Sulfotransferase 6B1-like. (302 aa)
	LOC107580464	Sulfotransferase 4A1. (284 aa)
	LOC107557424	Sulfotransferase 6B1-like. (302 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002793	ENSSGRP00000043750	ENSSGRP00000002793	ENSSGRP00000043750	annotation not available	annotation not available	0.638
ENSSGRP00000002793	ENSSGRP00000043751	ENSSGRP00000002793	ENSSGRP00000043751	annotation not available	annotation not available	0.526
ENSSGRP00000002793	LOC107552400	ENSSGRP00000002793	ENSSGRP00000065147	annotation not available	Sulfotransferase 6B1-like.	0.519
ENSSGRP00000002793	LOC107557424	ENSSGRP00000002793	ENSSGRP00000108529	annotation not available	Sulfotransferase 6B1-like.	0.524
ENSSGRP00000002793	LOC107561909	ENSSGRP00000002793	ENSSGRP00000043784	annotation not available	Amine sulfotransferase-like isoform X1.	0.521
ENSSGRP00000002793	LOC107580464	ENSSGRP00000002793	ENSSGRP00000085999	annotation not available	Sulfotransferase 4A1.	0.616
ENSSGRP00000002793	LOC107592236	ENSSGRP00000002793	ENSSGRP00000054908	annotation not available	Sulfotransferase 4A1-like.	0.616
ENSSGRP00000002793	LOC107600995	ENSSGRP00000002793	ENSSGRP00000046949	annotation not available	Amine sulfotransferase-like.	0.525
ENSSGRP00000024618	ENSSGRP00000043750	ENSSGRP00000024618	ENSSGRP00000043750	Sulfotransferase family 1, cytosolic sulfotransferase 5.	annotation not available	0.545
ENSSGRP00000024618	ENSSGRP00000043751	ENSSGRP00000024618	ENSSGRP00000043751	Sulfotransferase family 1, cytosolic sulfotransferase 5.	annotation not available	0.551
ENSSGRP00000024618	LOC107552400	ENSSGRP00000024618	ENSSGRP00000065147	Sulfotransferase family 1, cytosolic sulfotransferase 5.	Sulfotransferase 6B1-like.	0.522
ENSSGRP00000024618	LOC107557424	ENSSGRP00000024618	ENSSGRP00000108529	Sulfotransferase family 1, cytosolic sulfotransferase 5.	Sulfotransferase 6B1-like.	0.525
ENSSGRP00000024618	LOC107561909	ENSSGRP00000024618	ENSSGRP00000043784	Sulfotransferase family 1, cytosolic sulfotransferase 5.	Amine sulfotransferase-like isoform X1.	0.547
ENSSGRP00000024618	LOC107580464	ENSSGRP00000024618	ENSSGRP00000085999	Sulfotransferase family 1, cytosolic sulfotransferase 5.	Sulfotransferase 4A1.	0.621
ENSSGRP00000024618	LOC107592236	ENSSGRP00000024618	ENSSGRP00000054908	Sulfotransferase family 1, cytosolic sulfotransferase 5.	Sulfotransferase 4A1-like.	0.622
ENSSGRP00000024618	LOC107600995	ENSSGRP00000024618	ENSSGRP00000046949	Sulfotransferase family 1, cytosolic sulfotransferase 5.	Amine sulfotransferase-like.	0.544
ENSSGRP00000043750	ENSSGRP00000002793	ENSSGRP00000043750	ENSSGRP00000002793	annotation not available	annotation not available	0.638
ENSSGRP00000043750	ENSSGRP00000024618	ENSSGRP00000043750	ENSSGRP00000024618	annotation not available	Sulfotransferase family 1, cytosolic sulfotransferase 5.	0.545
ENSSGRP00000043750	ENSSGRP00000049785	ENSSGRP00000043750	ENSSGRP00000049785	annotation not available	annotation not available	0.535
ENSSGRP00000043750	LOC107552400	ENSSGRP00000043750	ENSSGRP00000065147	annotation not available	Sulfotransferase 6B1-like.	0.467