(12 nodes) Mixed, incl. Otospiralin, and Signalosome network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107586805	Myeloma-overexpressed gene 2 protein homolog. (57 aa)
	ENSSGRP00000001954	Otospiralin-like. (94 aa)
	ENSSGRP00000004434	Probable G-protein coupled receptor 160. (314 aa)
	ENSSGRP00000005064	annotation not available (98 aa)
	ENSSGRP00000049159	Otospiralin-like. (93 aa)
	LOC107591340	Sterile alpha motif domain-containing protein 7-like isoform X1. (529 aa)
	ENSSGRP00000064181	Probable G-protein coupled receptor 160. (303 aa)
	LOC107590236	Parapinopsin-like. (400 aa)
	LOC107590238	Myeloma-overexpressed gene 2 protein homolog. (66 aa)
	ENSSGRP00000071761	Otospiralin. (94 aa)
	ENSSGRP00000073006	Sterile alpha motif domain-containing protein 7-like. (529 aa)
	LOC107586803	Parapinopsin-like. (400 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000001954	ENSSGRP00000004434	ENSSGRP00000001954	ENSSGRP00000004434	Otospiralin-like.	Probable G-protein coupled receptor 160.	0.521
ENSSGRP00000001954	ENSSGRP00000005064	ENSSGRP00000001954	ENSSGRP00000005064	Otospiralin-like.	annotation not available	0.635
ENSSGRP00000001954	ENSSGRP00000049159	ENSSGRP00000001954	ENSSGRP00000049159	Otospiralin-like.	Otospiralin-like.	0.651
ENSSGRP00000001954	ENSSGRP00000064181	ENSSGRP00000001954	ENSSGRP00000064181	Otospiralin-like.	Probable G-protein coupled receptor 160.	0.521
ENSSGRP00000001954	ENSSGRP00000073006	ENSSGRP00000001954	ENSSGRP00000073006	Otospiralin-like.	Sterile alpha motif domain-containing protein 7-like.	0.505
ENSSGRP00000001954	LOC107586805	ENSSGRP00000001954	ENSSGRP00000001947	Otospiralin-like.	Myeloma-overexpressed gene 2 protein homolog.	0.520
ENSSGRP00000001954	LOC107590238	ENSSGRP00000001954	ENSSGRP00000071760	Otospiralin-like.	Myeloma-overexpressed gene 2 protein homolog.	0.520
ENSSGRP00000001954	LOC107591340	ENSSGRP00000001954	ENSSGRP00000063467	Otospiralin-like.	Sterile alpha motif domain-containing protein 7-like isoform X1.	0.505
ENSSGRP00000004434	ENSSGRP00000001954	ENSSGRP00000004434	ENSSGRP00000001954	Probable G-protein coupled receptor 160.	Otospiralin-like.	0.521
ENSSGRP00000004434	ENSSGRP00000071761	ENSSGRP00000004434	ENSSGRP00000071761	Probable G-protein coupled receptor 160.	Otospiralin.	0.521
ENSSGRP00000004434	ENSSGRP00000073006	ENSSGRP00000004434	ENSSGRP00000073006	Probable G-protein coupled receptor 160.	Sterile alpha motif domain-containing protein 7-like.	0.612
ENSSGRP00000004434	LOC107586805	ENSSGRP00000004434	ENSSGRP00000001947	Probable G-protein coupled receptor 160.	Myeloma-overexpressed gene 2 protein homolog.	0.482
ENSSGRP00000004434	LOC107590238	ENSSGRP00000004434	ENSSGRP00000071760	Probable G-protein coupled receptor 160.	Myeloma-overexpressed gene 2 protein homolog.	0.482
ENSSGRP00000004434	LOC107591340	ENSSGRP00000004434	ENSSGRP00000063467	Probable G-protein coupled receptor 160.	Sterile alpha motif domain-containing protein 7-like isoform X1.	0.612
ENSSGRP00000005064	ENSSGRP00000001954	ENSSGRP00000005064	ENSSGRP00000001954	annotation not available	Otospiralin-like.	0.635
ENSSGRP00000005064	ENSSGRP00000071761	ENSSGRP00000005064	ENSSGRP00000071761	annotation not available	Otospiralin.	0.635
ENSSGRP00000049159	ENSSGRP00000001954	ENSSGRP00000049159	ENSSGRP00000001954	Otospiralin-like.	Otospiralin-like.	0.651
ENSSGRP00000049159	ENSSGRP00000071761	ENSSGRP00000049159	ENSSGRP00000071761	Otospiralin-like.	Otospiralin.	0.650
ENSSGRP00000064181	ENSSGRP00000001954	ENSSGRP00000064181	ENSSGRP00000001954	Probable G-protein coupled receptor 160.	Otospiralin-like.	0.521
ENSSGRP00000064181	ENSSGRP00000071761	ENSSGRP00000064181	ENSSGRP00000071761	Probable G-protein coupled receptor 160.	Otospiralin.	0.521