(12 nodes) Mixed, incl. Adenylate cyclase binding, and Dyggve-Melchior-Clausen syndrome protein network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000026078	Putative E3 ubiquitin-protein ligase UBR7. (382 aa)
	LOC107598850	BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like isoform X1. (470 aa)
	dym	Dymeclin isoform X1. (670 aa)
	ENSSGRP00000050202	CBP80/20-dependent translation initiation factor. (577 aa)
	ENSSGRP00000058284	A-kinase anchor protein 6-like. (1085 aa)
	LOC107583814	BTB/POZ domain-containing protein 7-like. (1084 aa)
	LOC107550216	BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like. (474 aa)
	ENSSGRP00000094200	Dymeclin. (650 aa)
	ENSSGRP00000094217	CBP80/20-dependent translation initiation factor. (625 aa)
	ENSSGRP00000098275	A-kinase anchor protein 6-like isoform X1. (1092 aa)
	LOC107602295	BTB/POZ domain-containing protein 7-like isoform X1. (1080 aa)
	ENSSGRP00000112206	Zgc:171558. (979 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000026078	ENSSGRP00000094200	ENSSGRP00000026078	ENSSGRP00000094200	Putative E3 ubiquitin-protein ligase UBR7.	Dymeclin.	0.453
ENSSGRP00000026078	LOC107583814	ENSSGRP00000026078	ENSSGRP00000060020	Putative E3 ubiquitin-protein ligase UBR7.	BTB/POZ domain-containing protein 7-like.	0.444
ENSSGRP00000026078	LOC107602295	ENSSGRP00000026078	ENSSGRP00000100104	Putative E3 ubiquitin-protein ligase UBR7.	BTB/POZ domain-containing protein 7-like isoform X1.	0.444
ENSSGRP00000026078	dym	ENSSGRP00000026078	ENSSGRP00000050189	Putative E3 ubiquitin-protein ligase UBR7.	Dymeclin isoform X1.	0.453
ENSSGRP00000050202	ENSSGRP00000094200	ENSSGRP00000050202	ENSSGRP00000094200	CBP80/20-dependent translation initiation factor.	Dymeclin.	0.606
ENSSGRP00000050202	dym	ENSSGRP00000050202	ENSSGRP00000050189	CBP80/20-dependent translation initiation factor.	Dymeclin isoform X1.	0.606
ENSSGRP00000058284	ENSSGRP00000094200	ENSSGRP00000058284	ENSSGRP00000094200	A-kinase anchor protein 6-like.	Dymeclin.	0.518
ENSSGRP00000058284	ENSSGRP00000112206	ENSSGRP00000058284	ENSSGRP00000112206	A-kinase anchor protein 6-like.	Zgc:171558.	0.537
ENSSGRP00000058284	LOC107583814	ENSSGRP00000058284	ENSSGRP00000060020	A-kinase anchor protein 6-like.	BTB/POZ domain-containing protein 7-like.	0.491
ENSSGRP00000058284	LOC107602295	ENSSGRP00000058284	ENSSGRP00000100104	A-kinase anchor protein 6-like.	BTB/POZ domain-containing protein 7-like isoform X1.	0.491
ENSSGRP00000058284	dym	ENSSGRP00000058284	ENSSGRP00000050189	A-kinase anchor protein 6-like.	Dymeclin isoform X1.	0.518
ENSSGRP00000094200	ENSSGRP00000026078	ENSSGRP00000094200	ENSSGRP00000026078	Dymeclin.	Putative E3 ubiquitin-protein ligase UBR7.	0.453
ENSSGRP00000094200	ENSSGRP00000050202	ENSSGRP00000094200	ENSSGRP00000050202	Dymeclin.	CBP80/20-dependent translation initiation factor.	0.606
ENSSGRP00000094200	ENSSGRP00000058284	ENSSGRP00000094200	ENSSGRP00000058284	Dymeclin.	A-kinase anchor protein 6-like.	0.518
ENSSGRP00000094200	ENSSGRP00000094217	ENSSGRP00000094200	ENSSGRP00000094217	Dymeclin.	CBP80/20-dependent translation initiation factor.	0.606
ENSSGRP00000094200	ENSSGRP00000098275	ENSSGRP00000094200	ENSSGRP00000098275	Dymeclin.	A-kinase anchor protein 6-like isoform X1.	0.518
ENSSGRP00000094200	LOC107583814	ENSSGRP00000094200	ENSSGRP00000060020	Dymeclin.	BTB/POZ domain-containing protein 7-like.	0.572
ENSSGRP00000094200	LOC107602295	ENSSGRP00000094200	ENSSGRP00000100104	Dymeclin.	BTB/POZ domain-containing protein 7-like isoform X1.	0.572
ENSSGRP00000094217	ENSSGRP00000094200	ENSSGRP00000094217	ENSSGRP00000094200	CBP80/20-dependent translation initiation factor.	Dymeclin.	0.606
ENSSGRP00000094217	dym	ENSSGRP00000094217	ENSSGRP00000050189	CBP80/20-dependent translation initiation factor.	Dymeclin isoform X1.	0.606