(12 nodes) Mixed, incl. TSC-22/dip/bun family, and Negative regulation of macroautophagy network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107578649	TSC22 domain family protein 2-like. (497 aa)
	LOC107557003	G-protein coupled receptor 6-like. (332 aa)
	LOC107564602	G-protein coupled receptor 6-like. (332 aa)
	ENSSGRP00000019506	Nuclear receptor-binding protein-like. (154 aa)
	ENSSGRP00000027766	Nuclear receptor-binding protein 2-like. (434 aa)
	LOC107599881	Nuclear receptor-binding protein 2-like. (519 aa)
	TSC22D2	TSC22 domain family protein 2-like. (650 aa)
	LOC107556126	Nuclear receptor-binding protein-like. (386 aa)
	LOC107568259	TSC22 domain family protein 2-like isoform X1. (623 aa)
	nrbp1	Nuclear receptor-binding protein. (573 aa)
	tsc22d2	TSC22 domain family protein 2 isoform X1. (588 aa)
	LOC107551985	TSC22 domain family protein 1-like. (140 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000019506	LOC107551985	ENSSGRP00000019506	ENSSGRP00000112496	Nuclear receptor-binding protein-like.	TSC22 domain family protein 1-like.	0.453
ENSSGRP00000019506	LOC107557003	ENSSGRP00000019506	ENSSGRP00000008356	Nuclear receptor-binding protein-like.	G-protein coupled receptor 6-like.	0.489
ENSSGRP00000019506	LOC107564602	ENSSGRP00000019506	ENSSGRP00000013232	Nuclear receptor-binding protein-like.	G-protein coupled receptor 6-like.	0.489
ENSSGRP00000019506	LOC107568259	ENSSGRP00000019506	ENSSGRP00000084465	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2-like isoform X1.	0.732
ENSSGRP00000019506	LOC107578649	ENSSGRP00000019506	ENSSGRP00000004161	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2-like.	0.441
ENSSGRP00000019506	TSC22D2	ENSSGRP00000019506	ENSSGRP00000043875	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2-like.	0.732
ENSSGRP00000019506	tsc22d2	ENSSGRP00000019506	ENSSGRP00000108477	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2 isoform X1.	0.453
ENSSGRP00000027766	LOC107556126	ENSSGRP00000027766	ENSSGRP00000081305	Nuclear receptor-binding protein 2-like.	Nuclear receptor-binding protein-like.	0.408
ENSSGRP00000027766	LOC107557003	ENSSGRP00000027766	ENSSGRP00000008356	Nuclear receptor-binding protein 2-like.	G-protein coupled receptor 6-like.	0.634
ENSSGRP00000027766	LOC107564602	ENSSGRP00000027766	ENSSGRP00000013232	Nuclear receptor-binding protein 2-like.	G-protein coupled receptor 6-like.	0.634
LOC107551985	ENSSGRP00000019506	ENSSGRP00000112496	ENSSGRP00000019506	TSC22 domain family protein 1-like.	Nuclear receptor-binding protein-like.	0.453
LOC107551985	LOC107556126	ENSSGRP00000112496	ENSSGRP00000081305	TSC22 domain family protein 1-like.	Nuclear receptor-binding protein-like.	0.453
LOC107551985	nrbp1	ENSSGRP00000112496	ENSSGRP00000091935	TSC22 domain family protein 1-like.	Nuclear receptor-binding protein.	0.453
LOC107556126	ENSSGRP00000027766	ENSSGRP00000081305	ENSSGRP00000027766	Nuclear receptor-binding protein-like.	Nuclear receptor-binding protein 2-like.	0.408
LOC107556126	LOC107551985	ENSSGRP00000081305	ENSSGRP00000112496	Nuclear receptor-binding protein-like.	TSC22 domain family protein 1-like.	0.453
LOC107556126	LOC107557003	ENSSGRP00000081305	ENSSGRP00000008356	Nuclear receptor-binding protein-like.	G-protein coupled receptor 6-like.	0.489
LOC107556126	LOC107564602	ENSSGRP00000081305	ENSSGRP00000013232	Nuclear receptor-binding protein-like.	G-protein coupled receptor 6-like.	0.489
LOC107556126	LOC107568259	ENSSGRP00000081305	ENSSGRP00000084465	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2-like isoform X1.	0.732
LOC107556126	LOC107578649	ENSSGRP00000081305	ENSSGRP00000004161	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2-like.	0.441
LOC107556126	TSC22D2	ENSSGRP00000081305	ENSSGRP00000043875	Nuclear receptor-binding protein-like.	TSC22 domain family protein 2-like.	0.732