(12 nodes) Mixed, incl. Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger, and Peptidase C65 Otubain network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107552817	Ubiquitin carboxyl-terminal hydrolase 45-like. (799 aa)
	usp5	Ubiquitin carboxyl-terminal hydrolase 5 isoform X1. (853 aa)
	LOC107590670	Ubiquitin carboxyl-terminal hydrolase 5/13. (856 aa)
	ENSSGRP00000033582	Ubiquitin specific peptidase 28. (1055 aa)
	LOC107598439	Ubiquitin carboxyl-terminal hydrolase 5-like. (788 aa)
	ENSSGRP00000047762	Ubiquitin carboxyl-terminal hydrolase 25-like. (1063 aa)
	Usp25	Ubiquitin carboxyl-terminal hydrolase 25 isoform X1. (1158 aa)
	LOC107587766	Ubiquitin carboxyl-terminal hydrolase 45-like. (819 aa)
	ENSSGRP00000089920	Ubiquitin carboxyl-terminal hydrolase 13-like. (798 aa)
	LOC107556329	OTU domain-containing protein 6B isoform X1. (301 aa)
	ENSSGRP00000098685	Ubiquitin specific peptidase 28. (1011 aa)
	ENSSGRP00000103284	annotation not available (268 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000033582	ENSSGRP00000089920	ENSSGRP00000033582	ENSSGRP00000089920	Ubiquitin specific peptidase 28.	Ubiquitin carboxyl-terminal hydrolase 13-like.	0.713
ENSSGRP00000033582	ENSSGRP00000103284	ENSSGRP00000033582	ENSSGRP00000103284	Ubiquitin specific peptidase 28.	annotation not available	0.545
ENSSGRP00000033582	LOC107556329	ENSSGRP00000033582	ENSSGRP00000097870	Ubiquitin specific peptidase 28.	OTU domain-containing protein 6B isoform X1.	0.545
ENSSGRP00000033582	LOC107590670	ENSSGRP00000033582	ENSSGRP00000030961	Ubiquitin specific peptidase 28.	Ubiquitin carboxyl-terminal hydrolase 5/13.	0.713
ENSSGRP00000033582	LOC107598439	ENSSGRP00000033582	ENSSGRP00000043605	Ubiquitin specific peptidase 28.	Ubiquitin carboxyl-terminal hydrolase 5-like.	0.713
ENSSGRP00000033582	usp5	ENSSGRP00000033582	ENSSGRP00000030309	Ubiquitin specific peptidase 28.	Ubiquitin carboxyl-terminal hydrolase 5 isoform X1.	0.713
ENSSGRP00000047762	ENSSGRP00000089920	ENSSGRP00000047762	ENSSGRP00000089920	Ubiquitin carboxyl-terminal hydrolase 25-like.	Ubiquitin carboxyl-terminal hydrolase 13-like.	0.713
ENSSGRP00000047762	ENSSGRP00000103284	ENSSGRP00000047762	ENSSGRP00000103284	Ubiquitin carboxyl-terminal hydrolase 25-like.	annotation not available	0.545
ENSSGRP00000047762	LOC107556329	ENSSGRP00000047762	ENSSGRP00000097870	Ubiquitin carboxyl-terminal hydrolase 25-like.	OTU domain-containing protein 6B isoform X1.	0.545
ENSSGRP00000047762	LOC107590670	ENSSGRP00000047762	ENSSGRP00000030961	Ubiquitin carboxyl-terminal hydrolase 25-like.	Ubiquitin carboxyl-terminal hydrolase 5/13.	0.713
ENSSGRP00000047762	LOC107598439	ENSSGRP00000047762	ENSSGRP00000043605	Ubiquitin carboxyl-terminal hydrolase 25-like.	Ubiquitin carboxyl-terminal hydrolase 5-like.	0.713
ENSSGRP00000047762	usp5	ENSSGRP00000047762	ENSSGRP00000030309	Ubiquitin carboxyl-terminal hydrolase 25-like.	Ubiquitin carboxyl-terminal hydrolase 5 isoform X1.	0.713
ENSSGRP00000089920	ENSSGRP00000033582	ENSSGRP00000089920	ENSSGRP00000033582	Ubiquitin carboxyl-terminal hydrolase 13-like.	Ubiquitin specific peptidase 28.	0.713
ENSSGRP00000089920	ENSSGRP00000047762	ENSSGRP00000089920	ENSSGRP00000047762	Ubiquitin carboxyl-terminal hydrolase 13-like.	Ubiquitin carboxyl-terminal hydrolase 25-like.	0.713
ENSSGRP00000089920	ENSSGRP00000098685	ENSSGRP00000089920	ENSSGRP00000098685	Ubiquitin carboxyl-terminal hydrolase 13-like.	Ubiquitin specific peptidase 28.	0.713
ENSSGRP00000089920	ENSSGRP00000103284	ENSSGRP00000089920	ENSSGRP00000103284	Ubiquitin carboxyl-terminal hydrolase 13-like.	annotation not available	0.525
ENSSGRP00000089920	LOC107552817	ENSSGRP00000089920	ENSSGRP00000021237	Ubiquitin carboxyl-terminal hydrolase 13-like.	Ubiquitin carboxyl-terminal hydrolase 45-like.	0.420
ENSSGRP00000089920	LOC107556329	ENSSGRP00000089920	ENSSGRP00000097870	Ubiquitin carboxyl-terminal hydrolase 13-like.	OTU domain-containing protein 6B isoform X1.	0.525
ENSSGRP00000089920	LOC107587766	ENSSGRP00000089920	ENSSGRP00000081397	Ubiquitin carboxyl-terminal hydrolase 13-like.	Ubiquitin carboxyl-terminal hydrolase 45-like.	0.420
ENSSGRP00000089920	Usp25	ENSSGRP00000089920	ENSSGRP00000059226	Ubiquitin carboxyl-terminal hydrolase 13-like.	Ubiquitin carboxyl-terminal hydrolase 25 isoform X1.	0.713