(36 nodes) Mostly uncharacterized, incl. Apolipoprotein A-II (ApoA-II), and Oesophageal cancer-related gene 4 network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107592129	Uncharacterized protein LOC107592129. (391 aa)
	ENSSGRP00000002016	Uncharacterized protein LOC107592189. (381 aa)
	ENSSGRP00000002028	annotation not available (357 aa)
	LOC107592190	Type-4 ice-structuring protein LS-12-like. (130 aa)
	LOC107592191	Type-4 ice-structuring protein LS-12-like. (130 aa)
	ENSSGRP00000003283	Ras-associated and pleckstrin homology domains-containing protein 1-like. (286 aa)
	LOC107568378	Suppressor protein SRP40-like isoform X1. (171 aa)
	ENSSGRP00000006904	annotation not available (260 aa)
	ENSSGRP00000009815	Actinodin3. (238 aa)
	ENSSGRP00000020044	annotation not available (96 aa)
	ENSSGRP00000026915	Thy-1 membrane glycoprotein-like. (153 aa)
	ENSSGRP00000027409	annotation not available (332 aa)
	LOC107557624	Tripartite motif-containing protein 16-like. (539 aa)
	LOC107567985	OX-2 membrane glycoprotein-like. (382 aa)
	ENSSGRP00000035105	annotation not available (237 aa)
	ENSSGRP00000037575	annotation not available (315 aa)
	ENSSGRP00000040268	Olfactory receptor 8J3-like. (316 aa)
	LOC107561956	Tripartite motif-containing protein 16-like. (554 aa)
	ENSSGRP00000058164	Uncharacterized protein LOC107549481 isoform X1. (101 aa)
	ENSSGRP00000060798	annotation not available (189 aa)
	ENSSGRP00000060875	annotation not available (97 aa)
	Rai1	Retinoic acid-induced protein 1. (1273 aa)
	ENSSGRP00000066691	Extensin-like. (265 aa)
	LOC107557805	Tripartite motif-containing protein 16-like. (568 aa)
	LOC107563698-2	Uncharacterized protein LOC107563698 isoform X1. (871 aa)
	LOC107591367	Apolipoprotein L6-like isoform X1. (446 aa)
	ENSSGRP00000080650	Novel immune-type receptor 12. (378 aa)
	ENSSGRP00000081010	Novel immune-type receptor 5. (310 aa)
	ENSSGRP00000081197	annotation not available (319 aa)
	ENSSGRP00000096384	Actinodin3. (242 aa)
	apoa2	Apolipoprotein A-II. (130 aa)
	LOC107592467-2	Uncharacterized protein LOC107592467 isoform X1. (227 aa)
	LOC107592462	Uncharacterized protein LOC107592462. (393 aa)
	LOC107592460-2	Uncharacterized LOC107592460. (391 aa)
	LOC107548127	Thy-1 membrane glycoprotein-like. (218 aa)
	ENSSGRP00000105451	Zgc:109744. (910 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002016	ENSSGRP00000003283	ENSSGRP00000002016	ENSSGRP00000003283	Uncharacterized protein LOC107592189.	Ras-associated and pleckstrin homology domains-containing protein 1-like.	0.521
ENSSGRP00000002016	ENSSGRP00000006904	ENSSGRP00000002016	ENSSGRP00000006904	Uncharacterized protein LOC107592189.	annotation not available	0.448
ENSSGRP00000002016	ENSSGRP00000009815	ENSSGRP00000002016	ENSSGRP00000009815	Uncharacterized protein LOC107592189.	Actinodin3.	0.502
ENSSGRP00000002016	ENSSGRP00000020044	ENSSGRP00000002016	ENSSGRP00000020044	Uncharacterized protein LOC107592189.	annotation not available	0.489
ENSSGRP00000002016	ENSSGRP00000035105	ENSSGRP00000002016	ENSSGRP00000035105	Uncharacterized protein LOC107592189.	annotation not available	0.435
ENSSGRP00000002016	ENSSGRP00000060875	ENSSGRP00000002016	ENSSGRP00000060875	Uncharacterized protein LOC107592189.	annotation not available	0.479
ENSSGRP00000002016	ENSSGRP00000066691	ENSSGRP00000002016	ENSSGRP00000066691	Uncharacterized protein LOC107592189.	Extensin-like.	0.520
ENSSGRP00000002016	ENSSGRP00000096384	ENSSGRP00000002016	ENSSGRP00000096384	Uncharacterized protein LOC107592189.	Actinodin3.	0.493
ENSSGRP00000002028	ENSSGRP00000003283	ENSSGRP00000002028	ENSSGRP00000003283	annotation not available	Ras-associated and pleckstrin homology domains-containing protein 1-like.	0.488
ENSSGRP00000002028	ENSSGRP00000006904	ENSSGRP00000002028	ENSSGRP00000006904	annotation not available	annotation not available	0.465
ENSSGRP00000002028	ENSSGRP00000009815	ENSSGRP00000002028	ENSSGRP00000009815	annotation not available	Actinodin3.	0.494
ENSSGRP00000002028	ENSSGRP00000020044	ENSSGRP00000002028	ENSSGRP00000020044	annotation not available	annotation not available	0.516
ENSSGRP00000002028	ENSSGRP00000035105	ENSSGRP00000002028	ENSSGRP00000035105	annotation not available	annotation not available	0.468
ENSSGRP00000002028	ENSSGRP00000060875	ENSSGRP00000002028	ENSSGRP00000060875	annotation not available	annotation not available	0.518
ENSSGRP00000002028	ENSSGRP00000066691	ENSSGRP00000002028	ENSSGRP00000066691	annotation not available	Extensin-like.	0.510
ENSSGRP00000002028	ENSSGRP00000081197	ENSSGRP00000002028	ENSSGRP00000081197	annotation not available	annotation not available	0.408
ENSSGRP00000002028	ENSSGRP00000096384	ENSSGRP00000002028	ENSSGRP00000096384	annotation not available	Actinodin3.	0.471
ENSSGRP00000002028	LOC107548127	ENSSGRP00000002028	ENSSGRP00000097512	annotation not available	Thy-1 membrane glycoprotein-like.	0.403
ENSSGRP00000002028	LOC107568378	ENSSGRP00000002028	ENSSGRP00000003890	annotation not available	Suppressor protein SRP40-like isoform X1.	0.466
ENSSGRP00000003283	ENSSGRP00000002016	ENSSGRP00000003283	ENSSGRP00000002016	Ras-associated and pleckstrin homology domains-containing protein 1-like.	Uncharacterized protein LOC107592189.	0.521