(11 nodes) Mixed, incl. Oesophageal cancer-related gene 4, and Spin/Ssty Family network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107592129	Uncharacterized protein LOC107592129. (391 aa)
	ENSSGRP00000002016	Uncharacterized protein LOC107592189. (381 aa)
	ENSSGRP00000002028	annotation not available (357 aa)
	ENSSGRP00000003283	Ras-associated and pleckstrin homology domains-containing protein 1-like. (286 aa)
	ENSSGRP00000006904	annotation not available (260 aa)
	ENSSGRP00000020044	annotation not available (96 aa)
	ENSSGRP00000027409	annotation not available (332 aa)
	ENSSGRP00000035105	annotation not available (237 aa)
	ENSSGRP00000060798	annotation not available (189 aa)
	ENSSGRP00000060875	annotation not available (97 aa)
	ENSSGRP00000066691	Extensin-like. (265 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002016	ENSSGRP00000003283	ENSSGRP00000002016	ENSSGRP00000003283	Uncharacterized protein LOC107592189.	Ras-associated and pleckstrin homology domains-containing protein 1-like.	0.521
ENSSGRP00000002016	ENSSGRP00000006904	ENSSGRP00000002016	ENSSGRP00000006904	Uncharacterized protein LOC107592189.	annotation not available	0.448
ENSSGRP00000002016	ENSSGRP00000020044	ENSSGRP00000002016	ENSSGRP00000020044	Uncharacterized protein LOC107592189.	annotation not available	0.489
ENSSGRP00000002016	ENSSGRP00000035105	ENSSGRP00000002016	ENSSGRP00000035105	Uncharacterized protein LOC107592189.	annotation not available	0.435
ENSSGRP00000002016	ENSSGRP00000060875	ENSSGRP00000002016	ENSSGRP00000060875	Uncharacterized protein LOC107592189.	annotation not available	0.479
ENSSGRP00000002016	ENSSGRP00000066691	ENSSGRP00000002016	ENSSGRP00000066691	Uncharacterized protein LOC107592189.	Extensin-like.	0.520
ENSSGRP00000002028	ENSSGRP00000003283	ENSSGRP00000002028	ENSSGRP00000003283	annotation not available	Ras-associated and pleckstrin homology domains-containing protein 1-like.	0.488
ENSSGRP00000002028	ENSSGRP00000006904	ENSSGRP00000002028	ENSSGRP00000006904	annotation not available	annotation not available	0.465
ENSSGRP00000002028	ENSSGRP00000020044	ENSSGRP00000002028	ENSSGRP00000020044	annotation not available	annotation not available	0.516
ENSSGRP00000002028	ENSSGRP00000035105	ENSSGRP00000002028	ENSSGRP00000035105	annotation not available	annotation not available	0.468
ENSSGRP00000002028	ENSSGRP00000060875	ENSSGRP00000002028	ENSSGRP00000060875	annotation not available	annotation not available	0.518
ENSSGRP00000002028	ENSSGRP00000066691	ENSSGRP00000002028	ENSSGRP00000066691	annotation not available	Extensin-like.	0.510
ENSSGRP00000003283	ENSSGRP00000002016	ENSSGRP00000003283	ENSSGRP00000002016	Ras-associated and pleckstrin homology domains-containing protein 1-like.	Uncharacterized protein LOC107592189.	0.521
ENSSGRP00000003283	ENSSGRP00000002028	ENSSGRP00000003283	ENSSGRP00000002028	Ras-associated and pleckstrin homology domains-containing protein 1-like.	annotation not available	0.488
ENSSGRP00000003283	ENSSGRP00000006904	ENSSGRP00000003283	ENSSGRP00000006904	Ras-associated and pleckstrin homology domains-containing protein 1-like.	annotation not available	0.404
ENSSGRP00000003283	ENSSGRP00000020044	ENSSGRP00000003283	ENSSGRP00000020044	Ras-associated and pleckstrin homology domains-containing protein 1-like.	annotation not available	0.415
ENSSGRP00000003283	ENSSGRP00000060875	ENSSGRP00000003283	ENSSGRP00000060875	Ras-associated and pleckstrin homology domains-containing protein 1-like.	annotation not available	0.469
ENSSGRP00000003283	LOC107592129	ENSSGRP00000003283	ENSSGRP00000001998	Ras-associated and pleckstrin homology domains-containing protein 1-like.	Uncharacterized protein LOC107592129.	0.513
ENSSGRP00000006904	ENSSGRP00000002016	ENSSGRP00000006904	ENSSGRP00000002016	annotation not available	Uncharacterized protein LOC107592189.	0.448
ENSSGRP00000006904	ENSSGRP00000002028	ENSSGRP00000006904	ENSSGRP00000002028	annotation not available	annotation not available	0.465