(18 nodes) Mixed, incl. DIX domain, and Elastin metabolic process network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000004920	Dixin-A-like. (360 aa)
	ENSSGRP00000006720	Nuclear distribution protein nudE homolog 1-A-like. (213 aa)
	ENSSGRP00000026179	Leptin a. (171 aa)
	ENSSGRP00000053935	Girdin-like. (1658 aa)
	ENSSGRP00000055045	Disrupted in schizophrenia 1 protein-like. (818 aa)
	LOC107601639	Protein LBH-like. (103 aa)
	CCDC88A	Coiled-coil domain containing 88A. (1650 aa)
	LOC107557735	Disrupted in schizophrenia 1 protein-like isoform X1. (718 aa)
	ENSSGRP00000069284	Leptin a. (171 aa)
	ENSSGRP00000070929	Ciliary neurotrophic factor. (193 aa)
	LOC107601288	Nuclear distribution protein nudE homolog 1-like. (336 aa)
	ENSSGRP00000085398	DIX domain containing 1a. (394 aa)
	ENSSGRP00000099744	Homeobox B10a. (100 aa)
	ENSSGRP00000103434	Ciliary neurotrophic factor. (197 aa)
	Dixdc1	Dixin isoform X1. (703 aa)
	LOC107592656	Tumor necrosis factor receptor superfamily member 19-like. (370 aa)
	LOC107555279	Tumor necrosis factor receptor superfamily member 19-like. (357 aa)
	ccdc88c	Protein Daple. (2017 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dixdc1	ENSSGRP00000055045	ENSSGRP00000103802	ENSSGRP00000055045	Dixin isoform X1.	Disrupted in schizophrenia 1 protein-like.	0.604
Dixdc1	LOC107557735	ENSSGRP00000103802	ENSSGRP00000065546	Dixin isoform X1.	Disrupted in schizophrenia 1 protein-like isoform X1.	0.604
ENSSGRP00000004920	ENSSGRP00000055045	ENSSGRP00000004920	ENSSGRP00000055045	Dixin-A-like.	Disrupted in schizophrenia 1 protein-like.	0.604
ENSSGRP00000004920	LOC107557735	ENSSGRP00000004920	ENSSGRP00000065546	Dixin-A-like.	Disrupted in schizophrenia 1 protein-like isoform X1.	0.604
ENSSGRP00000006720	ENSSGRP00000055045	ENSSGRP00000006720	ENSSGRP00000055045	Nuclear distribution protein nudE homolog 1-A-like.	Disrupted in schizophrenia 1 protein-like.	0.735
ENSSGRP00000006720	LOC107557735	ENSSGRP00000006720	ENSSGRP00000065546	Nuclear distribution protein nudE homolog 1-A-like.	Disrupted in schizophrenia 1 protein-like isoform X1.	0.735
ENSSGRP00000026179	ENSSGRP00000055045	ENSSGRP00000026179	ENSSGRP00000055045	Leptin a.	Disrupted in schizophrenia 1 protein-like.	0.611
ENSSGRP00000026179	ENSSGRP00000070929	ENSSGRP00000026179	ENSSGRP00000070929	Leptin a.	Ciliary neurotrophic factor.	0.611
ENSSGRP00000026179	ENSSGRP00000103434	ENSSGRP00000026179	ENSSGRP00000103434	Leptin a.	Ciliary neurotrophic factor.	0.611
ENSSGRP00000026179	LOC107555279	ENSSGRP00000026179	ENSSGRP00000108250	Leptin a.	Tumor necrosis factor receptor superfamily member 19-like.	0.611
ENSSGRP00000026179	LOC107557735	ENSSGRP00000026179	ENSSGRP00000065546	Leptin a.	Disrupted in schizophrenia 1 protein-like isoform X1.	0.611
ENSSGRP00000026179	LOC107592656	ENSSGRP00000026179	ENSSGRP00000106587	Leptin a.	Tumor necrosis factor receptor superfamily member 19-like.	0.611
ENSSGRP00000026179	LOC107601639	ENSSGRP00000026179	ENSSGRP00000056597	Leptin a.	Protein LBH-like.	0.567
ENSSGRP00000055045	Dixdc1	ENSSGRP00000055045	ENSSGRP00000103802	Disrupted in schizophrenia 1 protein-like.	Dixin isoform X1.	0.604
ENSSGRP00000055045	ENSSGRP00000004920	ENSSGRP00000055045	ENSSGRP00000004920	Disrupted in schizophrenia 1 protein-like.	Dixin-A-like.	0.604
ENSSGRP00000055045	ENSSGRP00000006720	ENSSGRP00000055045	ENSSGRP00000006720	Disrupted in schizophrenia 1 protein-like.	Nuclear distribution protein nudE homolog 1-A-like.	0.735
ENSSGRP00000055045	ENSSGRP00000026179	ENSSGRP00000055045	ENSSGRP00000026179	Disrupted in schizophrenia 1 protein-like.	Leptin a.	0.611
ENSSGRP00000055045	ENSSGRP00000069284	ENSSGRP00000055045	ENSSGRP00000069284	Disrupted in schizophrenia 1 protein-like.	Leptin a.	0.611
ENSSGRP00000055045	ENSSGRP00000070929	ENSSGRP00000055045	ENSSGRP00000070929	Disrupted in schizophrenia 1 protein-like.	Ciliary neurotrophic factor.	0.611
ENSSGRP00000055045	ENSSGRP00000085398	ENSSGRP00000055045	ENSSGRP00000085398	Disrupted in schizophrenia 1 protein-like.	DIX domain containing 1a.	0.604