(35 nodes) Negative regulation of protein processing network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000088488	Cathepsin Z. (246 aa)
	LOC107564209	Cystatin-F-like. (148 aa)
	LOC107558841	Glia-derived nexin-like. (512 aa)
	tmem98	Transmembrane protein 98. (222 aa)
	ENSSGRP00000063992	Golgi apparatus protein 1-like. (1036 aa)
	LOC107593715	Plasminogen activator inhibitor 1-like. (392 aa)
	LOC107573092	Golgi apparatus protein 1-like. (1204 aa)
	ENSSGRP00000068816	Leucine-rich repeat serine/threonine-protein kinase 2-like. (2360 aa)
	chac1	Glutathione-specific gamma-glutamylcyclotransferase 1. (196 aa)
	LOC107596856	Cathepsin Z-like. (301 aa)
	ENSSGRP00000074440	Leucine-rich repeat kinase 2. (1866 aa)
	ENSSGRP00000075605	Plasminogen activator inhibitor 1-like. (289 aa)
	ENSSGRP00000078931	annotation not available (196 aa)
	LOC107554114	Bcl-2-like protein 12. (402 aa)
	ENSSGRP00000045745	annotation not available (339 aa)
	LOC107554171	Cathepsin Z-like. (301 aa)
	LOC107588752	Alpha-2-antiplasmin-like. (455 aa)
	LOC107583005	Uncharacterized protein LOC107583005. (388 aa)
	LOC107558025	Growth arrest-specific protein 1-like. (261 aa)
	ENSSGRP00000099788	ChaC, cation transport regulator homolog 1 (E. coli). (175 aa)
	ENSSGRP00000098086	Growth arrest-specific protein 1-like. (251 aa)
	cast	Calpastatin isoform X1. (884 aa)
	LOC107599232	Alpha-2-antiplasmin-like. (458 aa)
	ENSSGRP00000001588	Golgi apparatus protein 1-like isoform X1. (889 aa)
	LOC107559147	Golgi apparatus protein 1-like isoform X1. (1156 aa)
	ENSSGRP00000005354	Glutathione-specific gamma-glutamylcyclotransferase 1-like. (184 aa)
	ENSSGRP00000009643	Growth arrest-specific protein 1-like. (259 aa)
	LOC107562956	Alpha-2-antiplasmin-like. (481 aa)
	LOC107557610	Growth arrest-specific protein 1-like. (260 aa)
	ENSSGRP00000011802	Interleukin-1 receptor type 2-like isoform X1. (385 aa)
	LOC107585761	Glia-derived nexin-like. (395 aa)
	LOC107559771	Cystatin-C-like isoform X1. (148 aa)
	ENSSGRP00000026973	Growth arrest-specific protein 1-like. (239 aa)
	ENSSGRP00000032756	Calpastatin. (806 aa)
	ENSSGRP00000045234	Growth arrest-specific protein 1-like. (266 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005354	chac1	ENSSGRP00000005354	ENSSGRP00000071529	Glutathione-specific gamma-glutamylcyclotransferase 1-like.	Glutathione-specific gamma-glutamylcyclotransferase 1.	0.900
ENSSGRP00000009643	ENSSGRP00000026973	ENSSGRP00000009643	ENSSGRP00000026973	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.901
ENSSGRP00000009643	ENSSGRP00000045234	ENSSGRP00000009643	ENSSGRP00000045234	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.906
ENSSGRP00000009643	ENSSGRP00000098086	ENSSGRP00000009643	ENSSGRP00000098086	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.905
ENSSGRP00000009643	LOC107557610	ENSSGRP00000009643	ENSSGRP00000011602	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.902
ENSSGRP00000009643	LOC107558025	ENSSGRP00000009643	ENSSGRP00000099837	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.902
ENSSGRP00000026973	ENSSGRP00000009643	ENSSGRP00000026973	ENSSGRP00000009643	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.901
ENSSGRP00000026973	ENSSGRP00000045234	ENSSGRP00000026973	ENSSGRP00000045234	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.906
ENSSGRP00000026973	ENSSGRP00000098086	ENSSGRP00000026973	ENSSGRP00000098086	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.905
ENSSGRP00000026973	LOC107557610	ENSSGRP00000026973	ENSSGRP00000011602	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.902
ENSSGRP00000026973	LOC107558025	ENSSGRP00000026973	ENSSGRP00000099837	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.902
ENSSGRP00000045234	ENSSGRP00000009643	ENSSGRP00000045234	ENSSGRP00000009643	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.906
ENSSGRP00000045234	ENSSGRP00000026973	ENSSGRP00000045234	ENSSGRP00000026973	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.906
ENSSGRP00000045234	ENSSGRP00000098086	ENSSGRP00000045234	ENSSGRP00000098086	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.901
ENSSGRP00000045234	LOC107557610	ENSSGRP00000045234	ENSSGRP00000011602	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.905
ENSSGRP00000045234	LOC107558025	ENSSGRP00000045234	ENSSGRP00000099837	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.905
ENSSGRP00000075605	LOC107558841	ENSSGRP00000075605	ENSSGRP00000049651	Plasminogen activator inhibitor 1-like.	Glia-derived nexin-like.	0.687
ENSSGRP00000075605	LOC107585761	ENSSGRP00000075605	ENSSGRP00000014524	Plasminogen activator inhibitor 1-like.	Glia-derived nexin-like.	0.689
ENSSGRP00000075605	LOC107593715	ENSSGRP00000075605	ENSSGRP00000065679	Plasminogen activator inhibitor 1-like.	Plasminogen activator inhibitor 1-like.	0.901
ENSSGRP00000098086	ENSSGRP00000009643	ENSSGRP00000098086	ENSSGRP00000009643	Growth arrest-specific protein 1-like.	Growth arrest-specific protein 1-like.	0.905