(10 nodes) Neural crest cell fate commitment network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000038634	Endothelin receptor type Ab. (341 aa)
	LOC107568687	Wingless-type MMTV integration site family, member 8. (359 aa)
	LOC107551767	Endothelin-1-like. (189 aa)
	LOC107559691	Endothelin-1-like. (226 aa)
	LOC107598731	Endothelin receptor type A. (422 aa)
	LOC107568688	Wingless-type MMTV integration site family, member 8. (336 aa)
	ENSSGRP00000061257	Endothelin receptor type Ab. (353 aa)
	LOC107602559	Wingless-type MMTV integration site family, member 8. (354 aa)
	ENSSGRP00000038800	Wingless-type MMTV integration site family, member 8a. (346 aa)
	LOC107550651	Endothelin-1 receptor-like isoform X1. (422 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000038634	LOC107551767	ENSSGRP00000038634	ENSSGRP00000088481	Endothelin receptor type Ab.	Endothelin-1-like.	0.970
ENSSGRP00000038634	LOC107559691	ENSSGRP00000038634	ENSSGRP00000008726	Endothelin receptor type Ab.	Endothelin-1-like.	0.970
ENSSGRP00000061257	LOC107551767	ENSSGRP00000061257	ENSSGRP00000088481	Endothelin receptor type Ab.	Endothelin-1-like.	0.970
ENSSGRP00000061257	LOC107559691	ENSSGRP00000061257	ENSSGRP00000008726	Endothelin receptor type Ab.	Endothelin-1-like.	0.970
LOC107550651	LOC107551767	ENSSGRP00000062849	ENSSGRP00000088481	Endothelin-1 receptor-like isoform X1.	Endothelin-1-like.	0.997
LOC107550651	LOC107559691	ENSSGRP00000062849	ENSSGRP00000008726	Endothelin-1 receptor-like isoform X1.	Endothelin-1-like.	0.997
LOC107550651	LOC107598731	ENSSGRP00000062849	ENSSGRP00000013953	Endothelin-1 receptor-like isoform X1.	Endothelin receptor type A.	0.900
LOC107551767	ENSSGRP00000038634	ENSSGRP00000088481	ENSSGRP00000038634	Endothelin-1-like.	Endothelin receptor type Ab.	0.970
LOC107551767	ENSSGRP00000061257	ENSSGRP00000088481	ENSSGRP00000061257	Endothelin-1-like.	Endothelin receptor type Ab.	0.970
LOC107551767	LOC107550651	ENSSGRP00000088481	ENSSGRP00000062849	Endothelin-1-like.	Endothelin-1 receptor-like isoform X1.	0.997
LOC107551767	LOC107559691	ENSSGRP00000088481	ENSSGRP00000008726	Endothelin-1-like.	Endothelin-1-like.	0.900
LOC107551767	LOC107598731	ENSSGRP00000088481	ENSSGRP00000013953	Endothelin-1-like.	Endothelin receptor type A.	0.997
LOC107559691	ENSSGRP00000038634	ENSSGRP00000008726	ENSSGRP00000038634	Endothelin-1-like.	Endothelin receptor type Ab.	0.970
LOC107559691	ENSSGRP00000061257	ENSSGRP00000008726	ENSSGRP00000061257	Endothelin-1-like.	Endothelin receptor type Ab.	0.970
LOC107559691	LOC107550651	ENSSGRP00000008726	ENSSGRP00000062849	Endothelin-1-like.	Endothelin-1 receptor-like isoform X1.	0.997
LOC107559691	LOC107551767	ENSSGRP00000008726	ENSSGRP00000088481	Endothelin-1-like.	Endothelin-1-like.	0.900
LOC107559691	LOC107598731	ENSSGRP00000008726	ENSSGRP00000013953	Endothelin-1-like.	Endothelin receptor type A.	0.997
LOC107598731	LOC107550651	ENSSGRP00000013953	ENSSGRP00000062849	Endothelin receptor type A.	Endothelin-1 receptor-like isoform X1.	0.900
LOC107598731	LOC107551767	ENSSGRP00000013953	ENSSGRP00000088481	Endothelin receptor type A.	Endothelin-1-like.	0.997
LOC107598731	LOC107559691	ENSSGRP00000013953	ENSSGRP00000008726	Endothelin receptor type A.	Endothelin-1-like.	0.997