(24 nodes) Phasic smooth muscle contraction network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000023731	annotation not available (98 aa)
	ENSSGRP00000098335	5-hydroxytryptamine receptor 2B-like. (358 aa)
	ENSSGRP00000093230	T-box transcription factor TBX3-like. (317 aa)
	LOC107551767	Endothelin-1-like. (189 aa)
	LOC107597930	T-box transcription factor TBX3-like. (688 aa)
	ENSSGRP00000087418	Purinergic receptor P2X, ligand-gated ion channel, 2. (327 aa)
	ENSSGRP00000080346	Endothelin-3-like. (176 aa)
	p2rx2	P2X purinoceptor 2. (400 aa)
	GDNF	Glial cell line-derived neurotrophic factor-like. (235 aa)
	p2rx3	P2X purinoceptor 3. (411 aa)
	LOC107556786	P2X purinoceptor 3-like. (368 aa)
	LOC107566659	Endothelin B receptor-like. (417 aa)
	LOC107594747	Endothelin-3-like. (153 aa)
	LOC107551532	Endothelin-3-like. (153 aa)
	ENSSGRP00000047882	Endothelin 2. (132 aa)
	ENSSGRP00000037916	annotation not available (162 aa)
	ENSSGRP00000107568	Endothelin-2-like. (169 aa)
	ENSSGRP00000037655	Endothelin receptor type Bb. (349 aa)
	ENSSGRP00000037475	Glial cell line-derived neurotrophic factor-like. (200 aa)
	ENSSGRP00000035392	5-hydroxytryptamine receptor 2B-like. (433 aa)
	LOC107566860	T-box transcription factor TBX3-like isoform X1. (685 aa)
	LOC107564049	T-box transcription factor TBX2b-like. (684 aa)
	LOC107559691	Endothelin-1-like. (226 aa)
	ENSSGRP00000007757	annotation not available (58 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007757	ENSSGRP00000037475	ENSSGRP00000007757	ENSSGRP00000037475	annotation not available	Glial cell line-derived neurotrophic factor-like.	0.511
ENSSGRP00000007757	ENSSGRP00000037916	ENSSGRP00000007757	ENSSGRP00000037916	annotation not available	annotation not available	0.908
ENSSGRP00000007757	ENSSGRP00000047882	ENSSGRP00000007757	ENSSGRP00000047882	annotation not available	Endothelin 2.	0.805
ENSSGRP00000007757	ENSSGRP00000080346	ENSSGRP00000007757	ENSSGRP00000080346	annotation not available	Endothelin-3-like.	0.908
ENSSGRP00000007757	ENSSGRP00000107568	ENSSGRP00000007757	ENSSGRP00000107568	annotation not available	Endothelin-2-like.	0.805
ENSSGRP00000007757	GDNF	ENSSGRP00000007757	ENSSGRP00000076902	annotation not available	Glial cell line-derived neurotrophic factor-like.	0.511
ENSSGRP00000007757	LOC107551532	ENSSGRP00000007757	ENSSGRP00000071145	annotation not available	Endothelin-3-like.	0.931
ENSSGRP00000007757	LOC107551767	ENSSGRP00000007757	ENSSGRP00000088481	annotation not available	Endothelin-1-like.	0.979
ENSSGRP00000007757	LOC107559691	ENSSGRP00000007757	ENSSGRP00000008726	annotation not available	Endothelin-1-like.	0.979
ENSSGRP00000007757	LOC107594747	ENSSGRP00000007757	ENSSGRP00000071339	annotation not available	Endothelin-3-like.	0.931
ENSSGRP00000037475	ENSSGRP00000007757	ENSSGRP00000037475	ENSSGRP00000007757	Glial cell line-derived neurotrophic factor-like.	annotation not available	0.511
ENSSGRP00000037475	ENSSGRP00000037655	ENSSGRP00000037475	ENSSGRP00000037655	Glial cell line-derived neurotrophic factor-like.	Endothelin receptor type Bb.	0.511
ENSSGRP00000037475	ENSSGRP00000037916	ENSSGRP00000037475	ENSSGRP00000037916	Glial cell line-derived neurotrophic factor-like.	annotation not available	0.448
ENSSGRP00000037475	ENSSGRP00000080346	ENSSGRP00000037475	ENSSGRP00000080346	Glial cell line-derived neurotrophic factor-like.	Endothelin-3-like.	0.448
ENSSGRP00000037475	LOC107551532	ENSSGRP00000037475	ENSSGRP00000071145	Glial cell line-derived neurotrophic factor-like.	Endothelin-3-like.	0.448
ENSSGRP00000037475	LOC107566659	ENSSGRP00000037475	ENSSGRP00000073163	Glial cell line-derived neurotrophic factor-like.	Endothelin B receptor-like.	0.511
ENSSGRP00000037475	LOC107594747	ENSSGRP00000037475	ENSSGRP00000071339	Glial cell line-derived neurotrophic factor-like.	Endothelin-3-like.	0.448
ENSSGRP00000037655	ENSSGRP00000037475	ENSSGRP00000037655	ENSSGRP00000037475	Endothelin receptor type Bb.	Glial cell line-derived neurotrophic factor-like.	0.511
ENSSGRP00000037655	ENSSGRP00000037916	ENSSGRP00000037655	ENSSGRP00000037916	Endothelin receptor type Bb.	annotation not available	0.908
ENSSGRP00000037655	ENSSGRP00000047882	ENSSGRP00000037655	ENSSGRP00000047882	Endothelin receptor type Bb.	Endothelin 2.	0.805