(25 nodes) Terpenoid biosynthetic process network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000109218	Retinol dehydrogenase 10-A-like. (313 aa)
	hmgcs1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1. (580 aa)
	ENSSGRP00000065857	RUN and SH3 domain containing 2. (1203 aa)
	LOC107584387	Retinol dehydrogenase 10-B isoform X1. (340 aa)
	ggps1	Geranylgeranyl diphosphate synthase, type III. (361 aa)
	ENSSGRP00000091126	annotation not available (1309 aa)
	ENSSGRP00000096137	annotation not available (90 aa)
	LOC107550714	Retinol dehydrogenase 10-B-like isoform X1. (332 aa)
	LOC107595920	Iporin-like isoform X1. (1647 aa)
	LOC107598429	Uncharacterized protein LOC107598429 isoform X1. (1879 aa)
	fdps	Farnesyl pyrophosphate synthase isoform X1. (365 aa)
	ENSSGRP00000045345	annotation not available (110 aa)
	LOC107562564	Iporin-like isoform X1. (90 aa)
	LOC107567553	Retinol-binding protein 1-like. (138 aa)
	RBP1-2	Retinol binding protein 1. (119 aa)
	ENSSGRP00000042886	Lanosterol synthase-like. (386 aa)
	ENSSGRP00000028727	Farnesyl pyrophosphate synthase-like. (242 aa)
	LOC107596619	Uncharacterized protein LOC107596619 isoform X1. (1895 aa)
	ENSSGRP00000023856	Farnesyl pyrophosphate synthase-like. (341 aa)
	LOC107560245	Retinol dehydrogenase 10-A. (341 aa)
	LOC107549757	Retinoid isomerohydrolase / lutein isomerase. (393 aa)
	RPE65	Retinoid isomerohydrolase / lutein isomerase. (538 aa)
	LOC107583149	Retinol-binding protein 1-like. (138 aa)
	RBP1	Retinol-binding protein 1. (134 aa)
	ENSSGRP00000008793	Retinoid isomerohydrolase RPE65 a. (217 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000023856	ENSSGRP00000028727	ENSSGRP00000023856	ENSSGRP00000028727	Farnesyl pyrophosphate synthase-like.	Farnesyl pyrophosphate synthase-like.	0.901
ENSSGRP00000023856	ENSSGRP00000042886	ENSSGRP00000023856	ENSSGRP00000042886	Farnesyl pyrophosphate synthase-like.	Lanosterol synthase-like.	0.873
ENSSGRP00000023856	fdps	ENSSGRP00000023856	ENSSGRP00000046678	Farnesyl pyrophosphate synthase-like.	Farnesyl pyrophosphate synthase isoform X1.	0.901
ENSSGRP00000023856	ggps1	ENSSGRP00000023856	ENSSGRP00000087319	Farnesyl pyrophosphate synthase-like.	Geranylgeranyl diphosphate synthase, type III.	0.984
ENSSGRP00000023856	hmgcs1	ENSSGRP00000023856	ENSSGRP00000058761	Farnesyl pyrophosphate synthase-like.	Hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1.	0.991
ENSSGRP00000028727	ENSSGRP00000023856	ENSSGRP00000028727	ENSSGRP00000023856	Farnesyl pyrophosphate synthase-like.	Farnesyl pyrophosphate synthase-like.	0.901
ENSSGRP00000028727	ENSSGRP00000042886	ENSSGRP00000028727	ENSSGRP00000042886	Farnesyl pyrophosphate synthase-like.	Lanosterol synthase-like.	0.873
ENSSGRP00000028727	fdps	ENSSGRP00000028727	ENSSGRP00000046678	Farnesyl pyrophosphate synthase-like.	Farnesyl pyrophosphate synthase isoform X1.	0.900
ENSSGRP00000028727	ggps1	ENSSGRP00000028727	ENSSGRP00000087319	Farnesyl pyrophosphate synthase-like.	Geranylgeranyl diphosphate synthase, type III.	0.984
ENSSGRP00000028727	hmgcs1	ENSSGRP00000028727	ENSSGRP00000058761	Farnesyl pyrophosphate synthase-like.	Hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1.	0.984
ENSSGRP00000042886	ENSSGRP00000023856	ENSSGRP00000042886	ENSSGRP00000023856	Lanosterol synthase-like.	Farnesyl pyrophosphate synthase-like.	0.873
ENSSGRP00000042886	ENSSGRP00000028727	ENSSGRP00000042886	ENSSGRP00000028727	Lanosterol synthase-like.	Farnesyl pyrophosphate synthase-like.	0.873
ENSSGRP00000042886	ENSSGRP00000045345	ENSSGRP00000042886	ENSSGRP00000045345	Lanosterol synthase-like.	annotation not available	0.806
ENSSGRP00000042886	ENSSGRP00000065857	ENSSGRP00000042886	ENSSGRP00000065857	Lanosterol synthase-like.	RUN and SH3 domain containing 2.	0.806
ENSSGRP00000042886	ENSSGRP00000096137	ENSSGRP00000042886	ENSSGRP00000096137	Lanosterol synthase-like.	annotation not available	0.806
ENSSGRP00000042886	LOC107562564	ENSSGRP00000042886	ENSSGRP00000044656	Lanosterol synthase-like.	Iporin-like isoform X1.	0.806
ENSSGRP00000042886	LOC107595920	ENSSGRP00000042886	ENSSGRP00000108606	Lanosterol synthase-like.	Iporin-like isoform X1.	0.806
ENSSGRP00000042886	LOC107596619	ENSSGRP00000042886	ENSSGRP00000023867	Lanosterol synthase-like.	Uncharacterized protein LOC107596619 isoform X1.	0.810
ENSSGRP00000042886	LOC107598429	ENSSGRP00000042886	ENSSGRP00000046699	Lanosterol synthase-like.	Uncharacterized protein LOC107598429 isoform X1.	0.810
ENSSGRP00000042886	fdps	ENSSGRP00000042886	ENSSGRP00000046678	Lanosterol synthase-like.	Farnesyl pyrophosphate synthase isoform X1.	0.873