(44 nodes) Calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107548152	Claudin-4-like. (312 aa)
	ENSSGRP00000108738	Claudin-14-like. (253 aa)
	ENSSGRP00000105955	Claudin 12. (290 aa)
	ENSSGRP00000002896	Claudin-1-like. (150 aa)
	LOC107579975	Claudin-3-like. (214 aa)
	ENSSGRP00000005931	annotation not available (197 aa)
	LOC107580951	Claudin-3-like. (185 aa)
	ENSSGRP00000006106	annotation not available (184 aa)
	LOC107575918	Claudin-3-like. (218 aa)
	ENSSGRP00000017421	annotation not available (129 aa)
	ENSSGRP00000017422	Claudin-4-like. (180 aa)
	LOC107552167	Claudin-4-like. (215 aa)
	ENSSGRP00000032737	Claudin-23-like. (222 aa)
	LOC107552232	Claudin-like protein ZF-A9 isoform X1. (209 aa)
	ENSSGRP00000037871	annotation not available (168 aa)
	LOC107551261	Claudin-4-like. (210 aa)
	LOC107551262	Claudin-4-like. (209 aa)
	LOC107551266	Claudin-4-like. (206 aa)
	LOC107551269	Claudin-3-like. (215 aa)
	LOC107553040	Claudin-4-like. (215 aa)
	LOC107598663	Claudin-3-like. (215 aa)
	ENSSGRP00000060497	Claudin-4-like. (111 aa)
	ENSSGRP00000060498	annotation not available (103 aa)
	LOC107598569	Claudin-4-like. (206 aa)
	LOC107598615	Claudin-4-like. (155 aa)
	LOC107598666	Claudin-4-like. (191 aa)
	LOC107598570	Claudin-4-like. (247 aa)
	LOC107598571	Claudin-4-like. (209 aa)
	ENSSGRP00000060528	Claudin-4-like. (125 aa)
	ENSSGRP00000060530	annotation not available (171 aa)
	LOC107569287	Claudin-9-like. (196 aa)
	ENSSGRP00000069944	Zgc:136892. (242 aa)
	LOC107567186	Claudin-like protein ZF-A89. (208 aa)
	LOC107567167	Claudin-like protein ZF-A89. (210 aa)
	LOC107567187	Claudin-3-like. (218 aa)
	LOC107567749	Claudin-5-like. (217 aa)
	ENSSGRP00000091729	Claudin-23-like. (232 aa)
	ENSSGRP00000093290	Claudin-2-like. (249 aa)
	cldn12	Claudin-12. (335 aa)
	LOC107548150	Claudin-3-like. (214 aa)
	ENSSGRP00000104380	Claudin-4-like. (201 aa)
	LOC107548211	Claudin-like protein ZF-A89. (208 aa)
	ENSSGRP00000104387	annotation not available (151 aa)
	ENSSGRP00000104391	annotation not available (102 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002896	ENSSGRP00000017421	ENSSGRP00000002896	ENSSGRP00000017421	Claudin-1-like.	annotation not available	0.589
ENSSGRP00000002896	ENSSGRP00000017422	ENSSGRP00000002896	ENSSGRP00000017422	Claudin-1-like.	Claudin-4-like.	0.827
ENSSGRP00000002896	ENSSGRP00000032737	ENSSGRP00000002896	ENSSGRP00000032737	Claudin-1-like.	Claudin-23-like.	0.733
ENSSGRP00000002896	ENSSGRP00000060497	ENSSGRP00000002896	ENSSGRP00000060497	Claudin-1-like.	Claudin-4-like.	0.802
ENSSGRP00000002896	ENSSGRP00000060498	ENSSGRP00000002896	ENSSGRP00000060498	Claudin-1-like.	annotation not available	0.504
ENSSGRP00000002896	ENSSGRP00000060528	ENSSGRP00000002896	ENSSGRP00000060528	Claudin-1-like.	Claudin-4-like.	0.850
ENSSGRP00000002896	ENSSGRP00000091729	ENSSGRP00000002896	ENSSGRP00000091729	Claudin-1-like.	Claudin-23-like.	0.733
ENSSGRP00000002896	ENSSGRP00000093290	ENSSGRP00000002896	ENSSGRP00000093290	Claudin-1-like.	Claudin-2-like.	0.686
ENSSGRP00000002896	ENSSGRP00000104380	ENSSGRP00000002896	ENSSGRP00000104380	Claudin-1-like.	Claudin-4-like.	0.756
ENSSGRP00000002896	ENSSGRP00000104387	ENSSGRP00000002896	ENSSGRP00000104387	Claudin-1-like.	annotation not available	0.539
ENSSGRP00000002896	ENSSGRP00000104391	ENSSGRP00000002896	ENSSGRP00000104391	Claudin-1-like.	annotation not available	0.591
ENSSGRP00000002896	ENSSGRP00000105955	ENSSGRP00000002896	ENSSGRP00000105955	Claudin-1-like.	Claudin 12.	0.681
ENSSGRP00000002896	ENSSGRP00000108738	ENSSGRP00000002896	ENSSGRP00000108738	Claudin-1-like.	Claudin-14-like.	0.686
ENSSGRP00000002896	LOC107548150	ENSSGRP00000002896	ENSSGRP00000104377	Claudin-1-like.	Claudin-3-like.	0.740
ENSSGRP00000002896	LOC107548152	ENSSGRP00000002896	ENSSGRP00000104392	Claudin-1-like.	Claudin-4-like.	0.694
ENSSGRP00000002896	LOC107548211	ENSSGRP00000002896	ENSSGRP00000104386	Claudin-1-like.	Claudin-like protein ZF-A89.	0.753
ENSSGRP00000002896	LOC107551261	ENSSGRP00000002896	ENSSGRP00000037872	Claudin-1-like.	Claudin-4-like.	0.694
ENSSGRP00000002896	LOC107551262	ENSSGRP00000002896	ENSSGRP00000037873	Claudin-1-like.	Claudin-4-like.	0.757
ENSSGRP00000002896	LOC107551266	ENSSGRP00000002896	ENSSGRP00000037874	Claudin-1-like.	Claudin-4-like.	0.752
ENSSGRP00000002896	LOC107551269	ENSSGRP00000002896	ENSSGRP00000037877	Claudin-1-like.	Claudin-3-like.	0.738