(29 nodes) poly(A)+ mRNA export from nucleus network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000006917	Polymerase (DNA-directed), delta interacting protein 3. (177 aa)
	ENSSGRP00000001167	annotation not available (717 aa)
	gle1	Nucleoporin GLE1 isoform X1. (713 aa)
	LOC107548230	Nuclear RNA export factor 1-like isoform X1. (637 aa)
	LOC107558747	Zinc finger CCCH domain-containing protein 11A-like isoform X1. (801 aa)
	ENSSGRP00000005176	annotation not available (136 aa)
	LOC107572851	ATP-dependent RNA helicase DDX19/DBP5. (479 aa)
	pcid2	Nuclear mRNA export protein PCID2/THP1. (399 aa)
	lss	Germinal-center associated nuclear protein-like. (2116 aa)
	ENSSGRP00000039670	Zgc:153681. (508 aa)
	ENSSGRP00000042885	Germinal-center associated nuclear protein-like isoform X1. (2121 aa)
	LOC107600664	Enhancer of yellow 2 transcription factor. (95 aa)
	LOC107549634	Nuclear pore complex protein Nup93 isoform X1. (859 aa)
	LOC107563149	ATP-dependent RNA helicase DDX19A-like. (474 aa)
	ENSSGRP00000104847	Protein IWS1 homolog isoform X1. (442 aa)
	LOC107559416	Nuclear RNA export factor 1-like isoform X1. (647 aa)
	LOC107594334	Nuclear pore complex protein Nup133-like. (921 aa)
	ENSSGRP00000085537	Probable serine/threonine-protein kinase kinX. (523 aa)
	ENSSGRP00000084389	GLE1 RNA export mediator. (631 aa)
	sarnp	SAP domain-containing ribonucleoprotein isoform X1. (221 aa)
	ENSSGRP00000080156	SAP domain-containing ribonucleoprotein-like isoform X1. (53 aa)
	LOC107602423	Zinc finger CCCH domain-containing protein 11A-like isoform X1. (794 aa)
	ENSSGRP00000072357	Zgc:153681. (478 aa)
	LOC107599485	ATP-dependent RNA helicase DDX19A-like. (459 aa)
	LOC107561004	Trichohyalin-like isoform X1. (605 aa)
	LOC107551183	Transcription and mRNA export factor ENY2-like. (95 aa)
	ENSSGRP00000054902	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (475 aa)
	ENSSGRP00000061952	Nuclear pore complex protein Nup93-like. (828 aa)
	ENSSGRP00000021215	annotation not available (190 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005176	ENSSGRP00000039670	ENSSGRP00000005176	ENSSGRP00000039670	annotation not available	Zgc:153681.	0.934
ENSSGRP00000005176	ENSSGRP00000042885	ENSSGRP00000005176	ENSSGRP00000042885	annotation not available	Germinal-center associated nuclear protein-like isoform X1.	0.609
ENSSGRP00000005176	ENSSGRP00000054902	ENSSGRP00000005176	ENSSGRP00000054902	annotation not available	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast).	0.404
ENSSGRP00000005176	ENSSGRP00000061952	ENSSGRP00000005176	ENSSGRP00000061952	annotation not available	Nuclear pore complex protein Nup93-like.	0.724
ENSSGRP00000005176	ENSSGRP00000072357	ENSSGRP00000005176	ENSSGRP00000072357	annotation not available	Zgc:153681.	0.934
ENSSGRP00000005176	ENSSGRP00000080156	ENSSGRP00000005176	ENSSGRP00000080156	annotation not available	SAP domain-containing ribonucleoprotein-like isoform X1.	0.949
ENSSGRP00000005176	ENSSGRP00000084389	ENSSGRP00000005176	ENSSGRP00000084389	annotation not available	GLE1 RNA export mediator.	0.776
ENSSGRP00000005176	LOC107548230	ENSSGRP00000005176	ENSSGRP00000106359	annotation not available	Nuclear RNA export factor 1-like isoform X1.	0.934
ENSSGRP00000005176	LOC107549634	ENSSGRP00000005176	ENSSGRP00000051753	annotation not available	Nuclear pore complex protein Nup93 isoform X1.	0.724
ENSSGRP00000005176	LOC107551183	ENSSGRP00000005176	ENSSGRP00000027062	annotation not available	Transcription and mRNA export factor ENY2-like.	0.559
ENSSGRP00000005176	LOC107558747	ENSSGRP00000005176	ENSSGRP00000104996	annotation not available	Zinc finger CCCH domain-containing protein 11A-like isoform X1.	0.876
ENSSGRP00000005176	LOC107559416	ENSSGRP00000005176	ENSSGRP00000069622	annotation not available	Nuclear RNA export factor 1-like isoform X1.	0.934
ENSSGRP00000005176	LOC107563149	ENSSGRP00000005176	ENSSGRP00000052805	annotation not available	ATP-dependent RNA helicase DDX19A-like.	0.404
ENSSGRP00000005176	LOC107572851	ENSSGRP00000005176	ENSSGRP00000032611	annotation not available	ATP-dependent RNA helicase DDX19/DBP5.	0.404
ENSSGRP00000005176	LOC107594334	ENSSGRP00000005176	ENSSGRP00000085653	annotation not available	Nuclear pore complex protein Nup133-like.	0.737
ENSSGRP00000005176	LOC107599485	ENSSGRP00000005176	ENSSGRP00000053318	annotation not available	ATP-dependent RNA helicase DDX19A-like.	0.404
ENSSGRP00000005176	LOC107600664	ENSSGRP00000005176	ENSSGRP00000050714	annotation not available	Enhancer of yellow 2 transcription factor.	0.559
ENSSGRP00000005176	LOC107602423	ENSSGRP00000005176	ENSSGRP00000077634	annotation not available	Zinc finger CCCH domain-containing protein 11A-like isoform X1.	0.876
ENSSGRP00000005176	gle1	ENSSGRP00000005176	ENSSGRP00000102325	annotation not available	Nucleoporin GLE1 isoform X1.	0.776
ENSSGRP00000005176	lss	ENSSGRP00000005176	ENSSGRP00000037986	annotation not available	Germinal-center associated nuclear protein-like.	0.609