STRINGSTRING
ENSSGRP00000060416 ENSSGRP00000060416 ENSSGRP00000017901 ENSSGRP00000017901 Atm Atm ENSSGRP00000086962 ENSSGRP00000086962 DCAF1 DCAF1 ENSSGRP00000082159 ENSSGRP00000082159 ENSSGRP00000079598 ENSSGRP00000079598 LOC107581808 LOC107581808 rag1 rag1 ENSSGRP00000035811 ENSSGRP00000035811 Lef1 Lef1 LOC107564623 LOC107564623 LOC107564622 LOC107564622 LOC107564618 LOC107564618 ENSSGRP00000006007 ENSSGRP00000006007 LOC107594427 LOC107594427 ENSSGRP00000095695 ENSSGRP00000095695 Prkdc Prkdc ENSSGRP00000112163 ENSSGRP00000112163 lig4 lig4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSGRP00000060416annotation not available (107 aa)
ENSSGRP00000017901DDB1- and CUL4-associated factor 1. (1260 aa)
AtmSerine-protein kinase ATM. (2839 aa)
ENSSGRP00000086962Transcription factor 7-like 2. (362 aa)
DCAF1DDB1- and CUL4-associated factor 1. (1413 aa)
ENSSGRP00000082159X-ray repair complementing defective repair in Chinese hamster cells 4. (335 aa)
ENSSGRP00000079598Transcription factor 7. (380 aa)
LOC107581808V(D)J recombination-activating protein 2. (530 aa)
rag1V(D)J recombination-activating protein 1. (1063 aa)
ENSSGRP00000035811DNA repair protein XRCC4-like isoform X1. (343 aa)
Lef1Lymphoid enhancer-binding factor 1. (343 aa)
LOC107564623V(D)J recombination-activating protein 2-like. (530 aa)
LOC107564622V(D)J recombination-activating protein 2-like. (530 aa)
LOC107564618V(D)J recombination-activating protein 1-like. (970 aa)
ENSSGRP00000006007annotation not available (65 aa)
LOC107594427Lymphoid enhancer-binding factor 1-like. (371 aa)
ENSSGRP00000095695annotation not available (65 aa)
PrkdcDNA-dependent protein kinase catalytic subunit isoform X1. (3945 aa)
ENSSGRP00000112163Non-homologous end-joining factor 1-like. (218 aa)
lig4DNA ligase 4. (910 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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