(14 nodes) Caudal fin development network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107600624	R-spondin-2-like. (248 aa)
	LOC107592771	[histone H3]-lysine4/36 N-trimethyltransferase SMYD. (435 aa)
	LOC107548346	Dorsal-ventral patterning tolloid-like protein 1. (1022 aa)
	ENSSGRP00000023816	annotation not available (66 aa)
	ENSSGRP00000041345	Chordin-like. (861 aa)
	LOC107556063	Sonic hedgehog protein A. (418 aa)
	ENSSGRP00000068648	Bone morphogenetic protein 1-like. (977 aa)
	LOC107594786	[histone H3]-lysine4/36 N-trimethyltransferase SMYD. (443 aa)
	LOC107553124	Bone morphogenetic protein 1-like. (955 aa)
	LOC107591009	Sonic hedgehog protein A-like. (418 aa)
	ENSSGRP00000094572	Connexin 43. (282 aa)
	ENSSGRP00000097256	annotation not available (174 aa)
	LOC107591552	Dorsal-ventral patterning tolloid-like protein 1 isoform X1. (1022 aa)
	chrd	Chordin. (938 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000023816	ENSSGRP00000041345	ENSSGRP00000023816	ENSSGRP00000041345	annotation not available	Chordin-like.	0.843
ENSSGRP00000023816	chrd	ENSSGRP00000023816	ENSSGRP00000106203	annotation not available	Chordin.	0.843
ENSSGRP00000041345	ENSSGRP00000023816	ENSSGRP00000041345	ENSSGRP00000023816	Chordin-like.	annotation not available	0.843
ENSSGRP00000041345	ENSSGRP00000068648	ENSSGRP00000041345	ENSSGRP00000068648	Chordin-like.	Bone morphogenetic protein 1-like.	0.842
ENSSGRP00000041345	LOC107548346	ENSSGRP00000041345	ENSSGRP00000023623	Chordin-like.	Dorsal-ventral patterning tolloid-like protein 1.	0.843
ENSSGRP00000041345	LOC107553124	ENSSGRP00000041345	ENSSGRP00000089319	Chordin-like.	Bone morphogenetic protein 1-like.	0.842
ENSSGRP00000041345	LOC107591552	ENSSGRP00000041345	ENSSGRP00000101323	Chordin-like.	Dorsal-ventral patterning tolloid-like protein 1 isoform X1.	0.843
ENSSGRP00000041345	chrd	ENSSGRP00000041345	ENSSGRP00000106203	Chordin-like.	Chordin.	0.900
ENSSGRP00000068648	ENSSGRP00000041345	ENSSGRP00000068648	ENSSGRP00000041345	Bone morphogenetic protein 1-like.	Chordin-like.	0.842
ENSSGRP00000068648	chrd	ENSSGRP00000068648	ENSSGRP00000106203	Bone morphogenetic protein 1-like.	Chordin.	0.842
LOC107548346	ENSSGRP00000041345	ENSSGRP00000023623	ENSSGRP00000041345	Dorsal-ventral patterning tolloid-like protein 1.	Chordin-like.	0.843
LOC107548346	chrd	ENSSGRP00000023623	ENSSGRP00000106203	Dorsal-ventral patterning tolloid-like protein 1.	Chordin.	0.843
LOC107553124	ENSSGRP00000041345	ENSSGRP00000089319	ENSSGRP00000041345	Bone morphogenetic protein 1-like.	Chordin-like.	0.842
LOC107553124	chrd	ENSSGRP00000089319	ENSSGRP00000106203	Bone morphogenetic protein 1-like.	Chordin.	0.842
LOC107591552	ENSSGRP00000041345	ENSSGRP00000101323	ENSSGRP00000041345	Dorsal-ventral patterning tolloid-like protein 1 isoform X1.	Chordin-like.	0.843
LOC107591552	chrd	ENSSGRP00000101323	ENSSGRP00000106203	Dorsal-ventral patterning tolloid-like protein 1 isoform X1.	Chordin.	0.843
chrd	ENSSGRP00000023816	ENSSGRP00000106203	ENSSGRP00000023816	Chordin.	annotation not available	0.843
chrd	ENSSGRP00000041345	ENSSGRP00000106203	ENSSGRP00000041345	Chordin.	Chordin-like.	0.900
chrd	ENSSGRP00000068648	ENSSGRP00000106203	ENSSGRP00000068648	Chordin.	Bone morphogenetic protein 1-like.	0.842
chrd	LOC107548346	ENSSGRP00000106203	ENSSGRP00000023623	Chordin.	Dorsal-ventral patterning tolloid-like protein 1.	0.843