(59 nodes) Pectoral fin development network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107593970	Homeobox protein HoxB/C/D8. (256 aa)
	ENSSGRP00000002492	LOW QUALITY PROTEIN: nipped-B-like protein B. (256 aa)
	LOC107594933	PDZ and LIM domain protein 7 isoform X1. (420 aa)
	RING1	E3 ubiquitin-protein ligase RING2-A-like. (353 aa)
	ENSSGRP00000004929	Transcription factor Sp8-like. (372 aa)
	ENSSGRP00000005406	Fin bud initiation factor. (210 aa)
	FOXC1	Forkhead box protein C1. (207 aa)
	LOC107575101	Fibroblast growth factor 16. (203 aa)
	LOC107567817	E3 ubiquitin-protein ligase RING2-A-like. (352 aa)
	LOC107562919	Phosphatidylinositol 4-kinase type 2-beta-like. (367 aa)
	ENSSGRP00000011416	annotation not available (90 aa)
	ENSSGRP00000013629	annotation not available (99 aa)
	LOC107568990	Fibroblast growth factor 16-like. (203 aa)
	LOC107598745	ADP-ribosylation factor-like protein 6 isoform X1. (194 aa)
	tbx5	T-box transcription factor TBX5. (522 aa)
	ENSSGRP00000026589	Transcription factor Sp8. (455 aa)
	LOC107567991	ADP-ribosylation factor-like protein 6. (198 aa)
	LOC107573801	Transcription factor Sp8-like. (399 aa)
	LOC107582680	Protein cereblon-like isoform X1. (334 aa)
	LOC107594572	Cohesin loading factor subunit SCC2. (2328 aa)
	ENSSGRP00000038808	Nipped-B-like protein B. (2402 aa)
	LOC107564705	E3 ubiquitin-protein ligase RING2 isoform X1. (360 aa)
	ENSSGRP00000040199	Mediator complex subunit 12. (1828 aa)
	ENSSGRP00000040731	LOW QUALITY PROTEIN: class A basic helix-loop-helix protein 9-like. (151 aa)
	ENSSGRP00000044424	Homeobox protein Hox-C8a-like isoform X1. (257 aa)
	ENSSGRP00000044449	Heart- and neural crest derivatives-expressed protein 2-like. (208 aa)
	nipbl	Cohesin loading factor subunit SCC2. (2723 aa)
	LOC107583364	Class A basic helix-loop-helix protein 9-like. (268 aa)
	osr2	Protein odd-skipped-related 2 isoform X1. (233 aa)
	ENSSGRP00000051540	Forkhead box C1a. (213 aa)
	LOC107600624	R-spondin-2-like. (248 aa)
	ENSSGRP00000054226	NIPBL cohesin loading factor a. (2321 aa)
	LOC107578928	Class A basic helix-loop-helix protein 9-like. (278 aa)
	LOC107595742	PDZ and LIM domain protein 7-like isoform X1. (427 aa)
	ENSSGRP00000059310	Class A basic helix-loop-helix protein 9-like. (280 aa)
	LOC107589610	Protein transport protein Sec23A. (767 aa)
	LOC107571545	Cadherin 2, type 1, N-cadherin. (966 aa)
	OSR2	Protein odd-skipped-related 2-like isoform X1. (239 aa)
	LOC107556063	Sonic hedgehog protein A. (418 aa)
	LOC107552491	Heart- and neural crest derivatives-expressed protein 2. (208 aa)
	LOC107588719	Protein odd-skipped-related 1-like isoform X1. (286 aa)
	ENSSGRP00000070348	Fin bud initiation factor-like. (210 aa)
	dlx6	Homeobox protein DLX1/4/6. (246 aa)
	dlx5	Homeobox protein DLX-5. (283 aa)
	LOC107600696	Transcription factor Sp9. (439 aa)
	pi4k2b	Phosphatidylinositol 4-kinase type 2-beta. (503 aa)
	LOC107548611	Protein odd-skipped-related 1. (264 aa)
	ENSSGRP00000088274	T-box transcription factor TBX5-A-like. (208 aa)
	LOC107568336	Cadherin 2, type 1, N-cadherin. (908 aa)
	ENSSGRP00000091770	Cadherin 2, type 1, N-cadherin. (916 aa)
	LOC107591009	Sonic hedgehog protein A-like. (418 aa)
	LOC107554690	Mediator of RNA polymerase II transcription subunit 12. (2073 aa)
	LOC107588267	Transcription factor Sp9-like. (439 aa)
	LOC107586586	Protein transport protein Sec23A-like. (751 aa)
	LOC107568814	Transcription factor Sp8-like. (409 aa)
	crbn	Protein cereblon. (446 aa)
	LOC107589914	E3 ubiquitin-protein ligase RING2-like. (234 aa)
	LOC107591662	Homeobox protein Dlx6a-like. (248 aa)
	LOC107591663	Homeobox protein Dlx5a-like. (283 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000044449	ENSSGRP00000088274	ENSSGRP00000044449	ENSSGRP00000088274	Heart- and neural crest derivatives-expressed protein 2-like.	T-box transcription factor TBX5-A-like.	0.661
ENSSGRP00000044449	LOC107591662	ENSSGRP00000044449	ENSSGRP00000109296	Heart- and neural crest derivatives-expressed protein 2-like.	Homeobox protein Dlx6a-like.	0.453
ENSSGRP00000044449	LOC107591663	ENSSGRP00000044449	ENSSGRP00000109298	Heart- and neural crest derivatives-expressed protein 2-like.	Homeobox protein Dlx5a-like.	0.450
ENSSGRP00000044449	LOC107594933	ENSSGRP00000044449	ENSSGRP00000002765	Heart- and neural crest derivatives-expressed protein 2-like.	PDZ and LIM domain protein 7 isoform X1.	0.400
ENSSGRP00000044449	LOC107595742	ENSSGRP00000044449	ENSSGRP00000058784	Heart- and neural crest derivatives-expressed protein 2-like.	PDZ and LIM domain protein 7-like isoform X1.	0.400
ENSSGRP00000044449	dlx5	ENSSGRP00000044449	ENSSGRP00000072658	Heart- and neural crest derivatives-expressed protein 2-like.	Homeobox protein DLX-5.	0.450
ENSSGRP00000044449	dlx6	ENSSGRP00000044449	ENSSGRP00000072644	Heart- and neural crest derivatives-expressed protein 2-like.	Homeobox protein DLX1/4/6.	0.453
ENSSGRP00000044449	tbx5	ENSSGRP00000044449	ENSSGRP00000021910	Heart- and neural crest derivatives-expressed protein 2-like.	T-box transcription factor TBX5.	0.661
ENSSGRP00000088274	ENSSGRP00000044449	ENSSGRP00000088274	ENSSGRP00000044449	T-box transcription factor TBX5-A-like.	Heart- and neural crest derivatives-expressed protein 2-like.	0.661
ENSSGRP00000088274	LOC107552491	ENSSGRP00000088274	ENSSGRP00000063804	T-box transcription factor TBX5-A-like.	Heart- and neural crest derivatives-expressed protein 2.	0.661
ENSSGRP00000088274	LOC107594933	ENSSGRP00000088274	ENSSGRP00000002765	T-box transcription factor TBX5-A-like.	PDZ and LIM domain protein 7 isoform X1.	0.404
ENSSGRP00000088274	LOC107595742	ENSSGRP00000088274	ENSSGRP00000058784	T-box transcription factor TBX5-A-like.	PDZ and LIM domain protein 7-like isoform X1.	0.404
ENSSGRP00000091770	LOC107568336	ENSSGRP00000091770	ENSSGRP00000090482	Cadherin 2, type 1, N-cadherin.	Cadherin 2, type 1, N-cadherin.	0.901
ENSSGRP00000091770	LOC107571545	ENSSGRP00000091770	ENSSGRP00000063202	Cadherin 2, type 1, N-cadherin.	Cadherin 2, type 1, N-cadherin.	0.900
LOC107552491	ENSSGRP00000088274	ENSSGRP00000063804	ENSSGRP00000088274	Heart- and neural crest derivatives-expressed protein 2.	T-box transcription factor TBX5-A-like.	0.661
LOC107552491	LOC107591662	ENSSGRP00000063804	ENSSGRP00000109296	Heart- and neural crest derivatives-expressed protein 2.	Homeobox protein Dlx6a-like.	0.453
LOC107552491	LOC107591663	ENSSGRP00000063804	ENSSGRP00000109298	Heart- and neural crest derivatives-expressed protein 2.	Homeobox protein Dlx5a-like.	0.450
LOC107552491	LOC107594933	ENSSGRP00000063804	ENSSGRP00000002765	Heart- and neural crest derivatives-expressed protein 2.	PDZ and LIM domain protein 7 isoform X1.	0.400
LOC107552491	LOC107595742	ENSSGRP00000063804	ENSSGRP00000058784	Heart- and neural crest derivatives-expressed protein 2.	PDZ and LIM domain protein 7-like isoform X1.	0.400
LOC107552491	dlx5	ENSSGRP00000063804	ENSSGRP00000072658	Heart- and neural crest derivatives-expressed protein 2.	Homeobox protein DLX-5.	0.450