(22 nodes) Anterior/posterior axon guidance network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000003802	Scribble planar cell polarity protein. (1807 aa)
	ENSSGRP00000005750	annotation not available (70 aa)
	LOC107597704	Leucine-rich repeat-containing protein 1-like. (526 aa)
	ENSSGRP00000030104	Unc-5 netrin receptor C. (898 aa)
	ENSSGRP00000032081	annotation not available (347 aa)
	Vangl2	Vang-like protein 2. (440 aa)
	ENSSGRP00000042478	Vang-like protein 2. (279 aa)
	ENSSGRP00000051393	Unc-5 netrin receptor B. (924 aa)
	ENSSGRP00000058765	Unc-5 netrin receptor A. (859 aa)
	LOC107589700	LIM/homeobox protein Lhx1. (404 aa)
	LOC107586419	LIM/homeobox protein Lhx9-like isoform X1. (396 aa)
	ENSSGRP00000069023	Netrin receptor UNC5C-like. (920 aa)
	ENSSGRP00000079647	LIM/homeobox protein Lhx1-like. (325 aa)
	ENSSGRP00000079883	Unc-5 netrin receptor C. (943 aa)
	LOC107556179	LIM/homeobox protein Lhx9 isoform X1. (396 aa)
	LOC107588651	Netrin receptor UNC5B-b-like isoform X1. (940 aa)
	Lhx2	LIM/homeobox protein Lhx2 isoform X1. (365 aa)
	lrrc1	Leucine-rich repeat-containing protein 1. (528 aa)
	ENSSGRP00000094528	Scribble planar cell polarity protein. (1755 aa)
	LOC107584641	LIM/homeobox protein Lhx2-like. (295 aa)
	LOC107594947	Netrin receptor UNC5A-like. (794 aa)
	ENSSGRP00000104494	Netrin receptor UNC5C-like. (267 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003802	ENSSGRP00000042478	ENSSGRP00000003802	ENSSGRP00000042478	Scribble planar cell polarity protein.	Vang-like protein 2.	0.725
ENSSGRP00000003802	Vangl2	ENSSGRP00000003802	ENSSGRP00000042474	Scribble planar cell polarity protein.	Vang-like protein 2.	0.725
ENSSGRP00000042478	ENSSGRP00000003802	ENSSGRP00000042478	ENSSGRP00000003802	Vang-like protein 2.	Scribble planar cell polarity protein.	0.725
ENSSGRP00000042478	ENSSGRP00000094528	ENSSGRP00000042478	ENSSGRP00000094528	Vang-like protein 2.	Scribble planar cell polarity protein.	0.725
ENSSGRP00000042478	LOC107597704	ENSSGRP00000042478	ENSSGRP00000029644	Vang-like protein 2.	Leucine-rich repeat-containing protein 1-like.	0.612
ENSSGRP00000042478	lrrc1	ENSSGRP00000042478	ENSSGRP00000091817	Vang-like protein 2.	Leucine-rich repeat-containing protein 1.	0.612
ENSSGRP00000094528	ENSSGRP00000042478	ENSSGRP00000094528	ENSSGRP00000042478	Scribble planar cell polarity protein.	Vang-like protein 2.	0.725
ENSSGRP00000094528	Vangl2	ENSSGRP00000094528	ENSSGRP00000042474	Scribble planar cell polarity protein.	Vang-like protein 2.	0.725
LOC107597704	ENSSGRP00000042478	ENSSGRP00000029644	ENSSGRP00000042478	Leucine-rich repeat-containing protein 1-like.	Vang-like protein 2.	0.612
LOC107597704	Vangl2	ENSSGRP00000029644	ENSSGRP00000042474	Leucine-rich repeat-containing protein 1-like.	Vang-like protein 2.	0.612
Vangl2	ENSSGRP00000003802	ENSSGRP00000042474	ENSSGRP00000003802	Vang-like protein 2.	Scribble planar cell polarity protein.	0.725
Vangl2	ENSSGRP00000094528	ENSSGRP00000042474	ENSSGRP00000094528	Vang-like protein 2.	Scribble planar cell polarity protein.	0.725
Vangl2	LOC107597704	ENSSGRP00000042474	ENSSGRP00000029644	Vang-like protein 2.	Leucine-rich repeat-containing protein 1-like.	0.612
Vangl2	lrrc1	ENSSGRP00000042474	ENSSGRP00000091817	Vang-like protein 2.	Leucine-rich repeat-containing protein 1.	0.612
lrrc1	ENSSGRP00000042478	ENSSGRP00000091817	ENSSGRP00000042478	Leucine-rich repeat-containing protein 1.	Vang-like protein 2.	0.612
lrrc1	Vangl2	ENSSGRP00000091817	ENSSGRP00000042474	Leucine-rich repeat-containing protein 1.	Vang-like protein 2.	0.612