STRINGSTRING
ENSSGRP00000023637 ENSSGRP00000023637 LOC107580566 LOC107580566 LOC107587325 LOC107587325 LOC107561299 LOC107561299 LOC107586261 LOC107586261 LOC107563002 LOC107563002 LOC107584366 LOC107584366 rnf8 rnf8 ENSSGRP00000074199 ENSSGRP00000074199 ENSSGRP00000076285 ENSSGRP00000076285 ENSSGRP00000086117 ENSSGRP00000086117 LOC107554192 LOC107554192 LOC107562310 LOC107562310 LOC107588166 LOC107588166 recql5 recql5 LOC107597543 LOC107597543 ENSSGRP00000101525 ENSSGRP00000101525 LOC107566125 LOC107566125
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSGRP00000023637Negative elongation factor E-like. (360 aa)
LOC107580566E2F-associated phosphoprotein-like. (218 aa)
LOC107587325Negative elongation factor B-like. (613 aa)
LOC107561299E3 ubiquitin-protein ligase RNF168-like. (465 aa)
LOC107586261Transcription elongation factor SPT5-like isoform X1. (1080 aa)
LOC107563002E3 ubiquitin-protein ligase RNF168-like. (451 aa)
LOC107584366Negative elongation factor E-like. (195 aa)
rnf8E3 ubiquitin-protein ligase RNF8 isoform X1. (532 aa)
ENSSGRP00000074199Negative elongation factor C/D isoform X1. (582 aa)
ENSSGRP00000076285Sirtuin 6. (350 aa)
ENSSGRP00000086117E3 ubiquitin-protein ligase RNF8-like. (86 aa)
LOC107554192Negative elongation factor C/D-like. (593 aa)
LOC107562310Negative elongation factor A-like. (542 aa)
LOC107588166Negative elongation factor A-like. (546 aa)
recql5ATP-dependent DNA helicase Q5. (970 aa)
LOC107597543Transcription elongation factor SPT5 isoform X1. (1077 aa)
ENSSGRP00000101525NAD-dependent protein deacetylase sirtuin-6-like. (362 aa)
LOC107566125Negative elongation factor B-like. (634 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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