(12 nodes) Pwp2p-containing subcomplex of 90S preribosome network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000061315	LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog. (925 aa)
	ENSSGRP00000015598	WD repeat domain 36. (656 aa)
	LOC107577711	Hormonally up-regulated neu tumor-associated kinase homolog A-like. (664 aa)
	ENSSGRP00000031624	UTP6 small subunit processome component. (552 aa)
	utp18	U3 small nucleolar RNA-associated protein 18 homolog. (510 aa)
	ENSSGRP00000042428	annotation not available (110 aa)
	ENSSGRP00000042739	U3 small nucleolar RNA-associated protein 21. (745 aa)
	LOC107588971	Hormonally up-regulated neu tumor-associated kinase homolog A-like. (693 aa)
	ENSSGRP00000071420	WD repeat domain 3. (833 aa)
	utp6	U3 small nucleolar RNA-associated protein 6 homolog isoform X1. (597 aa)
	LOC107588835	Periodic tryptophan protein 2 homolog. (987 aa)
	ENSSGRP00000102036	WD repeat domain 3. (925 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000015598	ENSSGRP00000031624	ENSSGRP00000015598	ENSSGRP00000031624	WD repeat domain 36.	UTP6 small subunit processome component.	0.999
ENSSGRP00000015598	ENSSGRP00000061315	ENSSGRP00000015598	ENSSGRP00000061315	WD repeat domain 36.	LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog.	0.999
ENSSGRP00000015598	ENSSGRP00000071420	ENSSGRP00000015598	ENSSGRP00000071420	WD repeat domain 36.	WD repeat domain 3.	0.999
ENSSGRP00000015598	ENSSGRP00000102036	ENSSGRP00000015598	ENSSGRP00000102036	WD repeat domain 36.	WD repeat domain 3.	0.999
ENSSGRP00000015598	LOC107588835	ENSSGRP00000015598	ENSSGRP00000099647	WD repeat domain 36.	Periodic tryptophan protein 2 homolog.	0.999
ENSSGRP00000015598	utp18	ENSSGRP00000015598	ENSSGRP00000041047	WD repeat domain 36.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999
ENSSGRP00000015598	utp6	ENSSGRP00000015598	ENSSGRP00000079646	WD repeat domain 36.	U3 small nucleolar RNA-associated protein 6 homolog isoform X1.	0.999
ENSSGRP00000031624	ENSSGRP00000015598	ENSSGRP00000031624	ENSSGRP00000015598	UTP6 small subunit processome component.	WD repeat domain 36.	0.999
ENSSGRP00000031624	ENSSGRP00000042739	ENSSGRP00000031624	ENSSGRP00000042739	UTP6 small subunit processome component.	U3 small nucleolar RNA-associated protein 21.	0.999
ENSSGRP00000031624	ENSSGRP00000061315	ENSSGRP00000031624	ENSSGRP00000061315	UTP6 small subunit processome component.	LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog.	0.999
ENSSGRP00000031624	ENSSGRP00000071420	ENSSGRP00000031624	ENSSGRP00000071420	UTP6 small subunit processome component.	WD repeat domain 3.	0.999
ENSSGRP00000031624	ENSSGRP00000102036	ENSSGRP00000031624	ENSSGRP00000102036	UTP6 small subunit processome component.	WD repeat domain 3.	0.999
ENSSGRP00000031624	LOC107588835	ENSSGRP00000031624	ENSSGRP00000099647	UTP6 small subunit processome component.	Periodic tryptophan protein 2 homolog.	0.999
ENSSGRP00000031624	utp18	ENSSGRP00000031624	ENSSGRP00000041047	UTP6 small subunit processome component.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999
ENSSGRP00000042739	ENSSGRP00000031624	ENSSGRP00000042739	ENSSGRP00000031624	U3 small nucleolar RNA-associated protein 21.	UTP6 small subunit processome component.	0.999
ENSSGRP00000042739	ENSSGRP00000061315	ENSSGRP00000042739	ENSSGRP00000061315	U3 small nucleolar RNA-associated protein 21.	LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog.	0.999
ENSSGRP00000042739	ENSSGRP00000071420	ENSSGRP00000042739	ENSSGRP00000071420	U3 small nucleolar RNA-associated protein 21.	WD repeat domain 3.	0.999
ENSSGRP00000042739	ENSSGRP00000102036	ENSSGRP00000042739	ENSSGRP00000102036	U3 small nucleolar RNA-associated protein 21.	WD repeat domain 3.	0.999
ENSSGRP00000042739	LOC107588835	ENSSGRP00000042739	ENSSGRP00000099647	U3 small nucleolar RNA-associated protein 21.	Periodic tryptophan protein 2 homolog.	0.999
ENSSGRP00000042739	utp18	ENSSGRP00000042739	ENSSGRP00000041047	U3 small nucleolar RNA-associated protein 21.	U3 small nucleolar RNA-associated protein 18 homolog.	0.999