(40 nodes) Protein localization to cell surface network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107596154	Wingless-type MMTV integration site family, member 11. (352 aa)
	UNC50	Unc-50 inner nuclear membrane RNA binding protein. (218 aa)
	ENSSGRP00000004794	LOW QUALITY PROTEIN: vinculin-like. (67 aa)
	ENSSGRP00000006060	annotation not available (115 aa)
	ENSSGRP00000010201	annotation not available (120 aa)
	LOC107573533	ADP-ribosylation factor-binding protein GGA3-like isoform X1. (693 aa)
	LOC107601794	Vinculin-like. (1077 aa)
	LOC107574486	ADP-ribosylation factor 6-like. (175 aa)
	LOC107574045	Fibroblast growth factor 7-like. (194 aa)
	ENSSGRP00000016777	Protein RIC-3-like isoform X1. (123 aa)
	ENSSGRP00000016782	annotation not available (288 aa)
	Ric3	LOW QUALITY PROTEIN: protein RIC-3. (244 aa)
	mrap2	Melanocortin-2 receptor accessory protein 2. (214 aa)
	LOC107599845	GPI-anchor transamidase-like isoform X1. (391 aa)
	LOC107558177	GPI-anchor transamidase subunit K. (387 aa)
	ENSSGRP00000023251	annotation not available (93 aa)
	ENSSGRP00000027732	Wingless-type MMTV integration site family, member 11. (346 aa)
	ENSSGRP00000031770	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (637 aa)
	LOC107557128	Protein unc-50 homolog. (130 aa)
	ENSSGRP00000044019	Vinculin b. (1088 aa)
	PRRT1	Proline-rich transmembrane protein 1-like. (100 aa)
	LOC107586353	ADP-ribosylation factor-binding protein GGA1-like. (670 aa)
	ENSSGRP00000048468	ADP-ribosylation factor 6b. (111 aa)
	ENSSGRP00000049665	Vinculin-like. (1099 aa)
	ENSSGRP00000054479	Wingless-type MMTV integration site family, member 11. (344 aa)
	LOC107594263	Protein RIC-3-like. (359 aa)
	LOC107548453	Wingless-type MMTV integration site family, member 11. (353 aa)
	ENSSGRP00000069703	LOW QUALITY PROTEIN: vinculin-like. (1072 aa)
	ENSSGRP00000069704	annotation not available (68 aa)
	LOC107596774	Phosphatidylinositol glycan anchor biosynthesis class U protein-like. (435 aa)
	ENSSGRP00000072711	ADP-ribosylation factor-binding protein GGA3-like. (128 aa)
	ENSSGRP00000072713	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (549 aa)
	unc50	Protein unc-50 homolog. (224 aa)
	ENSSGRP00000073993	Melanocortin-2 receptor accessory protein 2A. (221 aa)
	ENSSGRP00000076849	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (647 aa)
	LOC107554168	Phosphatidylinositol glycan anchor biosynthesis class U protein-like. (435 aa)
	ENSSGRP00000093916	Astrotactin-2-like. (1099 aa)
	LOC107595354	Fibroblast growth factor 7-like. (195 aa)
	ENSSGRP00000100911	annotation not available (332 aa)
	ENSSGRP00000101877	ADP-ribosylation factor-binding protein GGA1-like. (597 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000010201	ENSSGRP00000031770	ENSSGRP00000010201	ENSSGRP00000031770	annotation not available	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	0.833
ENSSGRP00000010201	ENSSGRP00000072711	ENSSGRP00000010201	ENSSGRP00000072711	annotation not available	ADP-ribosylation factor-binding protein GGA3-like.	0.833
ENSSGRP00000010201	ENSSGRP00000072713	ENSSGRP00000010201	ENSSGRP00000072713	annotation not available	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	0.833
ENSSGRP00000010201	ENSSGRP00000076849	ENSSGRP00000010201	ENSSGRP00000076849	annotation not available	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.833
ENSSGRP00000010201	ENSSGRP00000101877	ENSSGRP00000010201	ENSSGRP00000101877	annotation not available	ADP-ribosylation factor-binding protein GGA1-like.	0.533
ENSSGRP00000010201	LOC107573533	ENSSGRP00000010201	ENSSGRP00000013061	annotation not available	ADP-ribosylation factor-binding protein GGA3-like isoform X1.	0.833
ENSSGRP00000010201	LOC107586353	ENSSGRP00000010201	ENSSGRP00000047492	annotation not available	ADP-ribosylation factor-binding protein GGA1-like.	0.533
ENSSGRP00000016777	LOC107557128	ENSSGRP00000016777	ENSSGRP00000041555	Protein RIC-3-like isoform X1.	Protein unc-50 homolog.	0.485
ENSSGRP00000016777	UNC50	ENSSGRP00000016777	ENSSGRP00000002241	Protein RIC-3-like isoform X1.	Unc-50 inner nuclear membrane RNA binding protein.	0.485
ENSSGRP00000016777	unc50	ENSSGRP00000016777	ENSSGRP00000073077	Protein RIC-3-like isoform X1.	Protein unc-50 homolog.	0.485
ENSSGRP00000016782	LOC107557128	ENSSGRP00000016782	ENSSGRP00000041555	annotation not available	Protein unc-50 homolog.	0.485
ENSSGRP00000016782	UNC50	ENSSGRP00000016782	ENSSGRP00000002241	annotation not available	Unc-50 inner nuclear membrane RNA binding protein.	0.485
ENSSGRP00000016782	unc50	ENSSGRP00000016782	ENSSGRP00000073077	annotation not available	Protein unc-50 homolog.	0.485
ENSSGRP00000031770	ENSSGRP00000010201	ENSSGRP00000031770	ENSSGRP00000010201	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	annotation not available	0.833
ENSSGRP00000031770	ENSSGRP00000048468	ENSSGRP00000031770	ENSSGRP00000048468	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	ADP-ribosylation factor 6b.	0.833
ENSSGRP00000031770	ENSSGRP00000101877	ENSSGRP00000031770	ENSSGRP00000101877	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	ADP-ribosylation factor-binding protein GGA1-like.	0.469
ENSSGRP00000031770	LOC107574486	ENSSGRP00000031770	ENSSGRP00000013820	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	ADP-ribosylation factor 6-like.	0.833
ENSSGRP00000031770	LOC107586353	ENSSGRP00000031770	ENSSGRP00000047492	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	ADP-ribosylation factor-binding protein GGA1-like.	0.467
ENSSGRP00000048468	ENSSGRP00000031770	ENSSGRP00000048468	ENSSGRP00000031770	ADP-ribosylation factor 6b.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	0.833
ENSSGRP00000048468	ENSSGRP00000072711	ENSSGRP00000048468	ENSSGRP00000072711	ADP-ribosylation factor 6b.	ADP-ribosylation factor-binding protein GGA3-like.	0.833