(54 nodes) Nucleobase-containing small molecule catabolic process network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107560928	C->U-editing enzyme APOBEC-2-like. (273 aa)
	LOC107598400	Single-stranded DNA cytosine deaminase-like. (210 aa)
	gda	Guanine deaminase isoform X1. (450 aa)
	ENSSGRP00000039112	Nudix (nucleoside diphosphate linked moiety X)-type motif 1. (142 aa)
	ENSSGRP00000037572	Angiopoietin-like 6. (480 aa)
	LOC107564650	Adenosine deaminase-like isoform X1. (376 aa)
	LOC107569728	Uridine phosphorylase 2-like. (313 aa)
	LOC107582291	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like. (452 aa)
	LOC107599502	Cytidine deaminase-like. (170 aa)
	ENSSGRP00000108316	Dihydropyrimidine dehydrogenase [NADP(+)]-like. (200 aa)
	LOC107568899	Uridine phosphorylase 2-like. (317 aa)
	ENSSGRP00000105569	Adenosine deaminase CECR1-A-like. (439 aa)
	LOC107602908	Inosine-uridine preferring nucleoside hydrolase-like. (317 aa)
	ENSSGRP00000100270	LOW QUALITY PROTEIN: dihydropyrimidine dehydrogenase [NADP(+)]-like. (1033 aa)
	ENSSGRP00000097536	Ectonucleoside triphosphate diphosphohydrolase 4-like. (539 aa)
	ENSSGRP00000095696	Beta-ureidopropionase-like. (266 aa)
	LOC107596847	Angiopoietin-related protein 2-like. (217 aa)
	ENSSGRP00000088903	Adenosine deaminase CECR1-A-like. (494 aa)
	ENSSGRP00000088249	Guanine deaminase. (435 aa)
	entpd4	Ectonucleoside triphosphate diphosphohydrolase 4 isoform X1. (619 aa)
	ENSSGRP00000084651	Ureidopropionase, beta. (293 aa)
	DPYD	Dihydropyrimidine dehydrogenase [NADP(+)]-like. (911 aa)
	ENSSGRP00000070486	annotation not available (78 aa)
	ENSSGRP00000070482	Dihydropyrimidine dehydrogenase a, tandem duplicate 1. (231 aa)
	ENSSGRP00000070481	Dihydropyrimidine dehydrogenase a, tandem duplicate 3. (372 aa)
	LOC107560988	Cytidine and dCMP deaminase domain-containing protein 1-like. (503 aa)
	LOC107603039	Cytidine and dCMP deaminase domain-containing protein 1-like. (504 aa)
	dpyd	Dihydropyrimidine dehydrogenase [NADP(+)] isoform X1. (1067 aa)
	ENSSGRP00000057280	Adenosine deaminase 2b. (353 aa)
	ENSSGRP00000055630	Cytidine deaminase b. (130 aa)
	LOC107563141	Cytidine deaminase-like. (154 aa)
	ENSSGRP00000033148	Putative cytidine deaminase. (175 aa)
	ENSSGRP00000052678	Cytidine deaminase-like. (158 aa)
	LOC107563138	Cytidine deaminase-like. (160 aa)
	adal	Adenosine deaminase-like protein isoform X1. (354 aa)
	LOC107597094	Cytidine deaminase-like. (133 aa)
	LOC107579388	Uridine phosphorylase 2-like. (247 aa)
	ENSSGRP00000004383	annotation not available (64 aa)
	ENSSGRP00000005868	Zgc:194887. (209 aa)
	ENSSGRP00000006310	C->U-editing enzyme APOBEC-2-like. (175 aa)
	UPB1	Beta-ureidopropionase. (264 aa)
	ENSSGRP00000009354	Uridine phosphorylase 1. (305 aa)
	ENSSGRP00000009992	annotation not available (207 aa)
	LOC107592807	8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase. (156 aa)
	LOC107567345	Fibrinogen-like protein 1-like protein. (273 aa)
	LOC107586870	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like. (452 aa)
	ENSSGRP00000019922	Probable C->U-editing enzyme APOBEC-2. (58 aa)
	ENSSGRP00000020615	Cytidine deaminase-like. (168 aa)
	LOC107572363	C->U-editing enzyme APOBEC-2-like. (259 aa)
	LOC107574722	Adenosine deaminase. (366 aa)
	LOC107595592	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like. (524 aa)
	LOC107590672	Probable uridine nucleosidase 1. (196 aa)
	LOC107549448	Single-stranded DNA cytosine deaminase-like. (210 aa)
	LOC107596632	Uridine phosphorylase 1-like. (314 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DPYD	ENSSGRP00000009354	ENSSGRP00000081734	ENSSGRP00000009354	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Uridine phosphorylase 1.	0.576
DPYD	ENSSGRP00000020615	ENSSGRP00000081734	ENSSGRP00000020615	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase-like.	0.405
DPYD	ENSSGRP00000033148	ENSSGRP00000081734	ENSSGRP00000033148	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Putative cytidine deaminase.	0.405
DPYD	ENSSGRP00000052678	ENSSGRP00000081734	ENSSGRP00000052678	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase-like.	0.405
DPYD	ENSSGRP00000055630	ENSSGRP00000081734	ENSSGRP00000055630	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase b.	0.405
DPYD	ENSSGRP00000084651	ENSSGRP00000081734	ENSSGRP00000084651	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Ureidopropionase, beta.	0.612
DPYD	ENSSGRP00000095696	ENSSGRP00000081734	ENSSGRP00000095696	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Beta-ureidopropionase-like.	0.916
DPYD	ENSSGRP00000108316	ENSSGRP00000081734	ENSSGRP00000108316	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	0.483
DPYD	LOC107563138	ENSSGRP00000081734	ENSSGRP00000052649	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase-like.	0.405
DPYD	LOC107563141	ENSSGRP00000081734	ENSSGRP00000052686	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase-like.	0.405
DPYD	LOC107568899	ENSSGRP00000081734	ENSSGRP00000106224	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Uridine phosphorylase 2-like.	0.955
DPYD	LOC107569728	ENSSGRP00000081734	ENSSGRP00000034053	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Uridine phosphorylase 2-like.	0.955
DPYD	LOC107579388	ENSSGRP00000081734	ENSSGRP00000002555	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Uridine phosphorylase 2-like.	0.955
DPYD	LOC107596632	ENSSGRP00000081734	ENSSGRP00000025538	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Uridine phosphorylase 1-like.	0.955
DPYD	LOC107597094	ENSSGRP00000081734	ENSSGRP00000002064	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase-like.	0.405
DPYD	LOC107599502	ENSSGRP00000081734	ENSSGRP00000053383	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Cytidine deaminase-like.	0.405
DPYD	UPB1	ENSSGRP00000081734	ENSSGRP00000007139	Dihydropyrimidine dehydrogenase [NADP(+)]-like.	Beta-ureidopropionase.	0.915
ENSSGRP00000006310	LOC107549448	ENSSGRP00000006310	ENSSGRP00000026863	C->U-editing enzyme APOBEC-2-like.	Single-stranded DNA cytosine deaminase-like.	0.489
ENSSGRP00000006310	LOC107564650	ENSSGRP00000006310	ENSSGRP00000035202	C->U-editing enzyme APOBEC-2-like.	Adenosine deaminase-like isoform X1.	0.516
ENSSGRP00000006310	LOC107574722	ENSSGRP00000006310	ENSSGRP00000024746	C->U-editing enzyme APOBEC-2-like.	Adenosine deaminase.	0.516