(20 nodes) Secretory granule lumen network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107558012	Multiple myeloma tumor-associated protein 2 homolog. (298 aa)
	ENSSGRP00000000933	Glia maturation factor gamma-like. (138 aa)
	ENSSGRP00000002887	annotation not available (60 aa)
	ENSSGRP00000007915	Proenkephalin-A-like. (252 aa)
	ENSSGRP00000020986	Placenta associated 8, tandem duplicate 1. (106 aa)
	ENSSGRP00000021112	Placenta associated 8, tandem duplicate 1. (106 aa)
	LOC107600928	Proprotein convertase subtilisin/kexin type 1. (765 aa)
	Gtpbp2	GTP-binding protein 2. (547 aa)
	LOC107602964	Glia maturation factor beta. (142 aa)
	ENSSGRP00000049478	annotation not available (542 aa)
	ENSSGRP00000056504	GTP-binding protein 2-like. (90 aa)
	ENSSGRP00000060613	annotation not available (79 aa)
	ENSSGRP00000064222	Neuroserpin-like. (387 aa)
	ENSSGRP00000068467	Proenkephalin-A-like. (252 aa)
	ENSSGRP00000093000	annotation not available (149 aa)
	pcsk1	Proprotein convertase subtilisin/kexin type 1. (765 aa)
	LOC107559555	GTP-binding protein 2-like isoform X1. (600 aa)
	LOC107553212	Glia maturation factor beta-like. (143 aa)
	s100z	Protein S100-Z. (96 aa)
	ENSSGRP00000107050	LOW QUALITY PROTEIN: multiple myeloma tumor-associated protein 2. (210 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002887	ENSSGRP00000049478	ENSSGRP00000002887	ENSSGRP00000049478	annotation not available	annotation not available	0.423
ENSSGRP00000002887	ENSSGRP00000056504	ENSSGRP00000002887	ENSSGRP00000056504	annotation not available	GTP-binding protein 2-like.	0.479
ENSSGRP00000002887	Gtpbp2	ENSSGRP00000002887	ENSSGRP00000035508	annotation not available	GTP-binding protein 2.	0.404
ENSSGRP00000007915	ENSSGRP00000068467	ENSSGRP00000007915	ENSSGRP00000068467	Proenkephalin-A-like.	Proenkephalin-A-like.	0.914
ENSSGRP00000049478	ENSSGRP00000002887	ENSSGRP00000049478	ENSSGRP00000002887	annotation not available	annotation not available	0.423
ENSSGRP00000056504	ENSSGRP00000002887	ENSSGRP00000056504	ENSSGRP00000002887	GTP-binding protein 2-like.	annotation not available	0.479
ENSSGRP00000068467	ENSSGRP00000007915	ENSSGRP00000068467	ENSSGRP00000007915	Proenkephalin-A-like.	Proenkephalin-A-like.	0.914
Gtpbp2	ENSSGRP00000002887	ENSSGRP00000035508	ENSSGRP00000002887	GTP-binding protein 2.	annotation not available	0.404