(25 nodes) Maintenance of protein localization in endoplasmic reticulum network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107599999	Uncharacterized protein C9orf172 homolog. (1086 aa)
	LOC107549777	Insulin-induced gene 2 protein-like. (226 aa)
	LOC107563718	ER lumen protein-retaining receptor 3-like. (215 aa)
	ENSSGRP00000094501	Insulin-induced gene 1 protein-like. (266 aa)
	ENSSGRP00000099063	Uncharacterized protein C9orf172 homolog isoform X1. (1069 aa)
	KDELR3	ER lumen protein-retaining receptor 3. (215 aa)
	LOC107549914	Insulin-induced gene 2 protein-like. (228 aa)
	tapt1	Transmembrane anterior posterior transformation protein 1 homolog isoform X1. (579 aa)
	LOC107572500	78 kDa glucose-regulated protein-like. (657 aa)
	ENSSGRP00000034654	Transmembrane anterior posterior transformation 1a. (393 aa)
	LOC107595635	ER lumen protein-retaining receptor 2. (212 aa)
	LOC107567952	Endoplasmic reticulum chaperone BiP. (675 aa)
	ENSSGRP00000025418	annotation not available (111 aa)
	LOC107602473	Protein RER1 isoform X1. (196 aa)
	ENSSGRP00000020588	78 kDa glucose-regulated protein-like. (323 aa)
	LOC107575191	Ankyrin repeat domain-containing protein 13C-like. (180 aa)
	INSIG1	Insulin-induced gene 1 protein. (251 aa)
	ENSSGRP00000001923	annotation not available (99 aa)
	LOC107572499	78 kDa glucose-regulated protein-like isoform X1. (667 aa)
	ENSSGRP00000038203	Transmembrane anterior posterior transformation 1b. (543 aa)
	ENSSGRP00000056346	Transmembrane anterior posterior transformation 1b. (472 aa)
	ENSSGRP00000051966	Ankyrin repeat domain-containing protein 13C. (177 aa)
	LOC107595758	Protein RER1-like isoform X1. (264 aa)
	LOC107555655	ER lumen protein-retaining receptor 2. (212 aa)
	ENSSGRP00000070643	KDEL endoplasmic reticulum protein retention receptor 2b. (211 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000070643	ENSSGRP00000099063	ENSSGRP00000070643	ENSSGRP00000099063	KDEL endoplasmic reticulum protein retention receptor 2b.	Uncharacterized protein C9orf172 homolog isoform X1.	0.421
ENSSGRP00000070643	LOC107595758	ENSSGRP00000070643	ENSSGRP00000059039	KDEL endoplasmic reticulum protein retention receptor 2b.	Protein RER1-like isoform X1.	0.527
ENSSGRP00000070643	LOC107599999	ENSSGRP00000070643	ENSSGRP00000074981	KDEL endoplasmic reticulum protein retention receptor 2b.	Uncharacterized protein C9orf172 homolog.	0.421
ENSSGRP00000070643	LOC107602473	ENSSGRP00000070643	ENSSGRP00000021874	KDEL endoplasmic reticulum protein retention receptor 2b.	Protein RER1 isoform X1.	0.527
ENSSGRP00000099063	ENSSGRP00000070643	ENSSGRP00000099063	ENSSGRP00000070643	Uncharacterized protein C9orf172 homolog isoform X1.	KDEL endoplasmic reticulum protein retention receptor 2b.	0.421
ENSSGRP00000099063	KDELR3	ENSSGRP00000099063	ENSSGRP00000099518	Uncharacterized protein C9orf172 homolog isoform X1.	ER lumen protein-retaining receptor 3.	0.421
ENSSGRP00000099063	LOC107555655	ENSSGRP00000099063	ENSSGRP00000060246	Uncharacterized protein C9orf172 homolog isoform X1.	ER lumen protein-retaining receptor 2.	0.421
ENSSGRP00000099063	LOC107563718	ENSSGRP00000099063	ENSSGRP00000087678	Uncharacterized protein C9orf172 homolog isoform X1.	ER lumen protein-retaining receptor 3-like.	0.421
ENSSGRP00000099063	LOC107595635	ENSSGRP00000099063	ENSSGRP00000032063	Uncharacterized protein C9orf172 homolog isoform X1.	ER lumen protein-retaining receptor 2.	0.421
KDELR3	ENSSGRP00000099063	ENSSGRP00000099518	ENSSGRP00000099063	ER lumen protein-retaining receptor 3.	Uncharacterized protein C9orf172 homolog isoform X1.	0.421
KDELR3	LOC107595758	ENSSGRP00000099518	ENSSGRP00000059039	ER lumen protein-retaining receptor 3.	Protein RER1-like isoform X1.	0.527
KDELR3	LOC107599999	ENSSGRP00000099518	ENSSGRP00000074981	ER lumen protein-retaining receptor 3.	Uncharacterized protein C9orf172 homolog.	0.421
KDELR3	LOC107602473	ENSSGRP00000099518	ENSSGRP00000021874	ER lumen protein-retaining receptor 3.	Protein RER1 isoform X1.	0.527
LOC107555655	ENSSGRP00000099063	ENSSGRP00000060246	ENSSGRP00000099063	ER lumen protein-retaining receptor 2.	Uncharacterized protein C9orf172 homolog isoform X1.	0.421
LOC107555655	LOC107595758	ENSSGRP00000060246	ENSSGRP00000059039	ER lumen protein-retaining receptor 2.	Protein RER1-like isoform X1.	0.527
LOC107555655	LOC107599999	ENSSGRP00000060246	ENSSGRP00000074981	ER lumen protein-retaining receptor 2.	Uncharacterized protein C9orf172 homolog.	0.421
LOC107555655	LOC107602473	ENSSGRP00000060246	ENSSGRP00000021874	ER lumen protein-retaining receptor 2.	Protein RER1 isoform X1.	0.527
LOC107563718	ENSSGRP00000099063	ENSSGRP00000087678	ENSSGRP00000099063	ER lumen protein-retaining receptor 3-like.	Uncharacterized protein C9orf172 homolog isoform X1.	0.421
LOC107563718	LOC107595758	ENSSGRP00000087678	ENSSGRP00000059039	ER lumen protein-retaining receptor 3-like.	Protein RER1-like isoform X1.	0.527
LOC107563718	LOC107599999	ENSSGRP00000087678	ENSSGRP00000074981	ER lumen protein-retaining receptor 3-like.	Uncharacterized protein C9orf172 homolog.	0.421