(34 nodes) Response to interferon-beta network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	shfl	Repressor of yield of DENV protein. (327 aa)
	LOC107578960	Interferon-inducible GTPase 5-like. (398 aa)
	ENSSGRP00000098753	Cis-aconitate decarboxylase-like. (476 aa)
	ENSSGRP00000100462	Uncharacterized protein LOC107593660 isoform X1. (453 aa)
	LOC107593663	Interferon-inducible GTPase 5-like. (389 aa)
	LOC107593663-2	Interferon-inducible GTPase 5-like isoform X1. (390 aa)
	ENSSGRP00000100470	Interferon-inducible GTPase 1-like. (386 aa)
	LOC107559588	Ubiquitin-conjugating enzyme E2 K-like. (216 aa)
	ENSSGRP00000104159	Interferon-inducible GTPase 5-like. (175 aa)
	LOC107551904	Ubiquitin-conjugating enzyme E2 G2-like. (166 aa)
	ENSSGRP00000104920	annotation not available (151 aa)
	LOC107581339	Ubiquitin-conjugating enzyme E2 G2 isoform X1. (165 aa)
	LOC107589755	XIAP-associated factor 1-like isoform X1. (271 aa)
	LOC107570041	Interferon-inducible GTPase 5-like. (379 aa)
	LOC107570041-2	Interferon-inducible GTPase 5-like. (379 aa)
	ube2k	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2). (200 aa)
	LOC107572461	Interferon-inducible GTPase 5-like. (387 aa)
	LOC107570155	Cis-aconitate decarboxylase-like. (508 aa)
	ENSSGRP00000040378	Shiftless antiviral inhibitor of ribosomal frameshifting. (210 aa)
	ube2k-2	Ubiquitin-conjugating enzyme E2 K. (200 aa)
	ENSSGRP00000041975	XIAP associated factor 1. (152 aa)
	LOC107563103	Interferon-inducible GTPase 5-like. (398 aa)
	LOC107570439	Interferon regulatory factor 1-like. (288 aa)
	ENSSGRP00000073059	annotation not available (391 aa)
	LOC107597428	Cis-aconitate decarboxylase-like. (496 aa)
	LOC107568662	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2). (200 aa)
	LOC107596587	Uncharacterized protein LOC107596587. (488 aa)
	ENSSGRP00000081313	Immunity-related GTPase family, e4. (261 aa)
	LOC107603236	Interferon regulatory factor 1-like. (288 aa)
	ENSSGRP00000004117	annotation not available (371 aa)
	LOC107585804	Interferon-inducible GTPase 5-like. (379 aa)
	LOC107575111	Interferon-inducible GTPase 5-like. (412 aa)
	ENSSGRP00000008364	Immunoresponsive gene 1, like. (439 aa)
	LOC107573956	Cis-aconitate decarboxylase-like. (498 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000041975	LOC107570439	ENSSGRP00000041975	ENSSGRP00000068488	XIAP associated factor 1.	Interferon regulatory factor 1-like.	0.428
ENSSGRP00000041975	LOC107603236	ENSSGRP00000041975	ENSSGRP00000082029	XIAP associated factor 1.	Interferon regulatory factor 1-like.	0.428
ENSSGRP00000098753	LOC107573956	ENSSGRP00000098753	ENSSGRP00000008370	Cis-aconitate decarboxylase-like.	Cis-aconitate decarboxylase-like.	0.902
ENSSGRP00000098753	LOC107597428	ENSSGRP00000098753	ENSSGRP00000074639	Cis-aconitate decarboxylase-like.	Cis-aconitate decarboxylase-like.	0.900
LOC107551904	LOC107559588	ENSSGRP00000104867	ENSSGRP00000103398	Ubiquitin-conjugating enzyme E2 G2-like.	Ubiquitin-conjugating enzyme E2 K-like.	0.731
LOC107551904	LOC107568662	ENSSGRP00000104867	ENSSGRP00000074919	Ubiquitin-conjugating enzyme E2 G2-like.	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	0.731
LOC107551904	LOC107581339	ENSSGRP00000104867	ENSSGRP00000107773	Ubiquitin-conjugating enzyme E2 G2-like.	Ubiquitin-conjugating enzyme E2 G2 isoform X1.	0.900
LOC107551904	ube2k	ENSSGRP00000104867	ENSSGRP00000035170	Ubiquitin-conjugating enzyme E2 G2-like.	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	0.731
LOC107551904	ube2k-2	ENSSGRP00000104867	ENSSGRP00000041246	Ubiquitin-conjugating enzyme E2 G2-like.	Ubiquitin-conjugating enzyme E2 K.	0.731
LOC107559588	LOC107551904	ENSSGRP00000103398	ENSSGRP00000104867	Ubiquitin-conjugating enzyme E2 K-like.	Ubiquitin-conjugating enzyme E2 G2-like.	0.731
LOC107559588	LOC107581339	ENSSGRP00000103398	ENSSGRP00000107773	Ubiquitin-conjugating enzyme E2 K-like.	Ubiquitin-conjugating enzyme E2 G2 isoform X1.	0.731
LOC107568662	LOC107551904	ENSSGRP00000074919	ENSSGRP00000104867	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	Ubiquitin-conjugating enzyme E2 G2-like.	0.731
LOC107568662	LOC107581339	ENSSGRP00000074919	ENSSGRP00000107773	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	Ubiquitin-conjugating enzyme E2 G2 isoform X1.	0.731
LOC107568662	ube2k	ENSSGRP00000074919	ENSSGRP00000035170	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).	0.900
LOC107570439	ENSSGRP00000041975	ENSSGRP00000068488	ENSSGRP00000041975	Interferon regulatory factor 1-like.	XIAP associated factor 1.	0.428
LOC107570439	LOC107589755	ENSSGRP00000068488	ENSSGRP00000084454	Interferon regulatory factor 1-like.	XIAP-associated factor 1-like isoform X1.	0.428
LOC107570439	LOC107603236	ENSSGRP00000068488	ENSSGRP00000082029	Interferon regulatory factor 1-like.	Interferon regulatory factor 1-like.	0.900
LOC107573956	ENSSGRP00000098753	ENSSGRP00000008370	ENSSGRP00000098753	Cis-aconitate decarboxylase-like.	Cis-aconitate decarboxylase-like.	0.902
LOC107573956	LOC107597428	ENSSGRP00000008370	ENSSGRP00000074639	Cis-aconitate decarboxylase-like.	Cis-aconitate decarboxylase-like.	0.903
LOC107581339	LOC107551904	ENSSGRP00000107773	ENSSGRP00000104867	Ubiquitin-conjugating enzyme E2 G2 isoform X1.	Ubiquitin-conjugating enzyme E2 G2-like.	0.900