(20 nodes) Positive regulation of chromatin binding network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000054723	Homeobox-containing protein 1-like. (312 aa)
	LOC107570277	Probable E3 ubiquitin-protein ligase DTX3. (368 aa)
	LOC107600340	Chromatin licensing and DNA replication factor 1. (677 aa)
	LOC107571783	Probable E3 ubiquitin-protein ligase DTX3 isoform X1. (384 aa)
	ENSSGRP00000011999	Proline-rich protein 2-like. (340 aa)
	gmnn	Geminin isoform X1. (221 aa)
	LOC107561457	Chromatin licensing and DNA replication factor 1. (667 aa)
	ENSSGRP00000041107	[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase. (876 aa)
	LOC107555567	Geminin-like isoform X1. (227 aa)
	LOC107602009	Uncharacterized protein LOC107602009. (419 aa)
	LOC107556027	Zinc finger protein 618-like. (828 aa)
	LOC107558863	Zinc finger protein 618-like isoform X1. (829 aa)
	ENSSGRP00000070604	Homeobox containing 1a. (295 aa)
	LOC107590900	Lysine-specific histone demethylase 1A isoform X1. (851 aa)
	ENSSGRP00000080354	Uncharacterized protein LOC107550323. (519 aa)
	ENSSGRP00000081077	Uncharacterized protein LOC107552605. (299 aa)
	LOC107588296	Homeobox-containing protein 1-like isoform X1. (447 aa)
	ENSSGRP00000108925	Si:dkey-3h3.3. (299 aa)
	ENSSGRP00000108926	Uncharacterized protein LOC107552564. (299 aa)
	LOC107589423	Pygopus homolog 2-like. (554 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107555567	LOC107561457	ENSSGRP00000049726	ENSSGRP00000034085	Geminin-like isoform X1.	Chromatin licensing and DNA replication factor 1.	0.997
LOC107555567	LOC107600340	ENSSGRP00000049726	ENSSGRP00000011356	Geminin-like isoform X1.	Chromatin licensing and DNA replication factor 1.	0.997
LOC107561457	LOC107555567	ENSSGRP00000034085	ENSSGRP00000049726	Chromatin licensing and DNA replication factor 1.	Geminin-like isoform X1.	0.997
LOC107561457	gmnn	ENSSGRP00000034085	ENSSGRP00000031871	Chromatin licensing and DNA replication factor 1.	Geminin isoform X1.	0.997
LOC107600340	LOC107555567	ENSSGRP00000011356	ENSSGRP00000049726	Chromatin licensing and DNA replication factor 1.	Geminin-like isoform X1.	0.997
LOC107600340	gmnn	ENSSGRP00000011356	ENSSGRP00000031871	Chromatin licensing and DNA replication factor 1.	Geminin isoform X1.	0.997
gmnn	LOC107561457	ENSSGRP00000031871	ENSSGRP00000034085	Geminin isoform X1.	Chromatin licensing and DNA replication factor 1.	0.997
gmnn	LOC107600340	ENSSGRP00000031871	ENSSGRP00000011356	Geminin isoform X1.	Chromatin licensing and DNA replication factor 1.	0.997