(9 nodes) Locomotory exploration behavior network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000074440	Leucine-rich repeat kinase 2. (1866 aa)
	C12orf10	UPF0160 protein MYG1, mitochondrial-like. (221 aa)
	LOC107582722	Ubiquitin-protein ligase E3 A. (876 aa)
	LOC107585142	Ubiquitin-protein ligase E3A-like. (912 aa)
	tnr	Tenascin-R isoform X1. (1364 aa)
	ENSSGRP00000018703	annotation not available (277 aa)
	ENSSGRP00000035473	annotation not available (246 aa)
	LOC107558359	tenascin-R-like. (1323 aa)
	ENSSGRP00000068816	Leucine-rich repeat serine/threonine-protein kinase 2-like. (2360 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C12orf10	ENSSGRP00000018703	ENSSGRP00000007111	ENSSGRP00000018703	UPF0160 protein MYG1, mitochondrial-like.	annotation not available	0.483
C12orf10	ENSSGRP00000035473	ENSSGRP00000007111	ENSSGRP00000035473	UPF0160 protein MYG1, mitochondrial-like.	annotation not available	0.463
ENSSGRP00000018703	C12orf10	ENSSGRP00000018703	ENSSGRP00000007111	annotation not available	UPF0160 protein MYG1, mitochondrial-like.	0.483
ENSSGRP00000035473	C12orf10	ENSSGRP00000035473	ENSSGRP00000007111	annotation not available	UPF0160 protein MYG1, mitochondrial-like.	0.463
LOC107558359	tnr	ENSSGRP00000064067	ENSSGRP00000013639	tenascin-R-like.	Tenascin-R isoform X1.	0.486
LOC107582722	LOC107585142	ENSSGRP00000070216	ENSSGRP00000011461	Ubiquitin-protein ligase E3 A.	Ubiquitin-protein ligase E3A-like.	0.900
LOC107585142	LOC107582722	ENSSGRP00000011461	ENSSGRP00000070216	Ubiquitin-protein ligase E3A-like.	Ubiquitin-protein ligase E3 A.	0.900
tnr	LOC107558359	ENSSGRP00000013639	ENSSGRP00000064067	Tenascin-R isoform X1.	tenascin-R-like.	0.486