(12 nodes) TORC1 signaling network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107590577	Protein CLEC16A-like isoform X1. (1053 aa)
	LOC107553319	Regulatory-associated protein of mTOR-like isoform X1. (1362 aa)
	card11	Caspase recruitment domain-containing protein 11. (1137 aa)
	LOC107564227	Serine/threonine-protein kinase mTOR. (2552 aa)
	rptor	Regulatory-associated protein of mTOR isoform X1. (1363 aa)
	ENSSGRP00000094403	C-type lectin domain containing 16A. (974 aa)
	LOC107596811	Nitrogen permease regulator 3-like protein isoform X1. (609 aa)
	ENSSGRP00000096176	annotation not available (64 aa)
	LOC107594963	Serine/threonine-protein kinase mTOR-like. (2549 aa)
	ENSSGRP00000007709	annotation not available (60 aa)
	ENSSGRP00000009650	Caspase recruitment domain family, member 11. (810 aa)
	ENSSGRP00000036947	NPR3-like, GATOR1 complex subunit. (585 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007709	LOC107553319	ENSSGRP00000007709	ENSSGRP00000038059	annotation not available	Regulatory-associated protein of mTOR-like isoform X1.	0.733
ENSSGRP00000007709	LOC107564227	ENSSGRP00000007709	ENSSGRP00000054966	annotation not available	Serine/threonine-protein kinase mTOR.	0.711
ENSSGRP00000007709	LOC107594963	ENSSGRP00000007709	ENSSGRP00000003759	annotation not available	Serine/threonine-protein kinase mTOR-like.	0.711
ENSSGRP00000007709	rptor	ENSSGRP00000007709	ENSSGRP00000084096	annotation not available	Regulatory-associated protein of mTOR isoform X1.	0.733
ENSSGRP00000036947	LOC107553319	ENSSGRP00000036947	ENSSGRP00000038059	NPR3-like, GATOR1 complex subunit.	Regulatory-associated protein of mTOR-like isoform X1.	0.733
ENSSGRP00000036947	LOC107564227	ENSSGRP00000036947	ENSSGRP00000054966	NPR3-like, GATOR1 complex subunit.	Serine/threonine-protein kinase mTOR.	0.711
ENSSGRP00000036947	LOC107594963	ENSSGRP00000036947	ENSSGRP00000003759	NPR3-like, GATOR1 complex subunit.	Serine/threonine-protein kinase mTOR-like.	0.711
ENSSGRP00000036947	rptor	ENSSGRP00000036947	ENSSGRP00000084096	NPR3-like, GATOR1 complex subunit.	Regulatory-associated protein of mTOR isoform X1.	0.733
ENSSGRP00000096176	LOC107553319	ENSSGRP00000096176	ENSSGRP00000038059	annotation not available	Regulatory-associated protein of mTOR-like isoform X1.	0.733
ENSSGRP00000096176	LOC107564227	ENSSGRP00000096176	ENSSGRP00000054966	annotation not available	Serine/threonine-protein kinase mTOR.	0.711
ENSSGRP00000096176	LOC107594963	ENSSGRP00000096176	ENSSGRP00000003759	annotation not available	Serine/threonine-protein kinase mTOR-like.	0.711
ENSSGRP00000096176	rptor	ENSSGRP00000096176	ENSSGRP00000084096	annotation not available	Regulatory-associated protein of mTOR isoform X1.	0.733
LOC107553319	ENSSGRP00000007709	ENSSGRP00000038059	ENSSGRP00000007709	Regulatory-associated protein of mTOR-like isoform X1.	annotation not available	0.733
LOC107553319	ENSSGRP00000036947	ENSSGRP00000038059	ENSSGRP00000036947	Regulatory-associated protein of mTOR-like isoform X1.	NPR3-like, GATOR1 complex subunit.	0.733
LOC107553319	ENSSGRP00000096176	ENSSGRP00000038059	ENSSGRP00000096176	Regulatory-associated protein of mTOR-like isoform X1.	annotation not available	0.733
LOC107553319	LOC107564227	ENSSGRP00000038059	ENSSGRP00000054966	Regulatory-associated protein of mTOR-like isoform X1.	Serine/threonine-protein kinase mTOR.	0.999
LOC107553319	LOC107594963	ENSSGRP00000038059	ENSSGRP00000003759	Regulatory-associated protein of mTOR-like isoform X1.	Serine/threonine-protein kinase mTOR-like.	0.999
LOC107553319	LOC107596811	ENSSGRP00000038059	ENSSGRP00000087907	Regulatory-associated protein of mTOR-like isoform X1.	Nitrogen permease regulator 3-like protein isoform X1.	0.733
LOC107553319	rptor	ENSSGRP00000038059	ENSSGRP00000084096	Regulatory-associated protein of mTOR-like isoform X1.	Regulatory-associated protein of mTOR isoform X1.	0.900
LOC107564227	ENSSGRP00000007709	ENSSGRP00000054966	ENSSGRP00000007709	Serine/threonine-protein kinase mTOR.	annotation not available	0.711