(18 nodes) Erythrocyte maturation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000002233	Group 10 secretory phospholipase A2-like. (144 aa)
	LOC107560292	Erythropoietin-like. (183 aa)
	LOC107564700	Group 10 secretory phospholipase A2-like. (157 aa)
	LOC107559458	Solute carrier family 25 (mitochondrial iron transporter), member 28/37. (351 aa)
	LOC107595276	Erythropoietin. (183 aa)
	LOC107601732	TFIIH basal transcription factor complex helicase XPD subunit. (783 aa)
	LOC107565018	Solute carrier family 40 (iron-regulated transporter), member 1. (531 aa)
	ENSSGRP00000077727	Excision repair cross-complementation group 2. (678 aa)
	ENSSGRP00000076749	3-hydroxybutyrate dehydrogenase, type 2. (235 aa)
	LOC107584471	Uncharacterized protein LOC107584471. (548 aa)
	LOC107592291	Cellular tumor antigen p53-like. (387 aa)
	bdh2	3-hydroxybutyrate dehydrogenase type 2 isoform X1. (251 aa)
	LOC107599945	Cellular tumor antigen p53. (381 aa)
	LOC107599438	2,4-dienoyl-CoA reductase, mitochondrial-like. (565 aa)
	LOC107557686	Macrophage erythroblast attacher-like. (430 aa)
	LOC107553129	Solute carrier family 25 (mitochondrial iron transporter), member 28/37. (307 aa)
	LOC107602151	Solute carrier family 40 member 1-like. (572 aa)
	LOC107588333	Macrophage erythroblast attacher. (419 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000077727	LOC107592291	ENSSGRP00000077727	ENSSGRP00000074183	Excision repair cross-complementation group 2.	Cellular tumor antigen p53-like.	0.554
ENSSGRP00000077727	LOC107599945	ENSSGRP00000077727	ENSSGRP00000059520	Excision repair cross-complementation group 2.	Cellular tumor antigen p53.	0.554
LOC107553129	LOC107565018	ENSSGRP00000096969	ENSSGRP00000079799	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	Solute carrier family 40 (iron-regulated transporter), member 1.	0.489
LOC107553129	LOC107602151	ENSSGRP00000096969	ENSSGRP00000092084	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	Solute carrier family 40 member 1-like.	0.489
LOC107559458	LOC107565018	ENSSGRP00000085958	ENSSGRP00000079799	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	Solute carrier family 40 (iron-regulated transporter), member 1.	0.489
LOC107559458	LOC107602151	ENSSGRP00000085958	ENSSGRP00000092084	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	Solute carrier family 40 member 1-like.	0.489
LOC107560292	LOC107595276	ENSSGRP00000024523	ENSSGRP00000082561	Erythropoietin-like.	Erythropoietin.	0.900
LOC107565018	LOC107553129	ENSSGRP00000079799	ENSSGRP00000096969	Solute carrier family 40 (iron-regulated transporter), member 1.	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	0.489
LOC107565018	LOC107559458	ENSSGRP00000079799	ENSSGRP00000085958	Solute carrier family 40 (iron-regulated transporter), member 1.	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	0.489
LOC107592291	ENSSGRP00000077727	ENSSGRP00000074183	ENSSGRP00000077727	Cellular tumor antigen p53-like.	Excision repair cross-complementation group 2.	0.554
LOC107592291	LOC107601732	ENSSGRP00000074183	ENSSGRP00000080870	Cellular tumor antigen p53-like.	TFIIH basal transcription factor complex helicase XPD subunit.	0.554
LOC107595276	LOC107560292	ENSSGRP00000082561	ENSSGRP00000024523	Erythropoietin.	Erythropoietin-like.	0.900
LOC107599945	ENSSGRP00000077727	ENSSGRP00000059520	ENSSGRP00000077727	Cellular tumor antigen p53.	Excision repair cross-complementation group 2.	0.554
LOC107599945	LOC107601732	ENSSGRP00000059520	ENSSGRP00000080870	Cellular tumor antigen p53.	TFIIH basal transcription factor complex helicase XPD subunit.	0.554
LOC107601732	LOC107592291	ENSSGRP00000080870	ENSSGRP00000074183	TFIIH basal transcription factor complex helicase XPD subunit.	Cellular tumor antigen p53-like.	0.554
LOC107601732	LOC107599945	ENSSGRP00000080870	ENSSGRP00000059520	TFIIH basal transcription factor complex helicase XPD subunit.	Cellular tumor antigen p53.	0.554
LOC107602151	LOC107553129	ENSSGRP00000092084	ENSSGRP00000096969	Solute carrier family 40 member 1-like.	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	0.489
LOC107602151	LOC107559458	ENSSGRP00000092084	ENSSGRP00000085958	Solute carrier family 40 member 1-like.	Solute carrier family 25 (mitochondrial iron transporter), member 28/37.	0.489