(6 nodes) Nuclear pore inner ring network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000037365	Nucleoporin 155. (1149 aa)
	ENSSGRP00000025381	Nuclear pore complex protein Nup205-like. (1402 aa)
	ENSSGRP00000092777	Nuclear pore complex protein Nup188. (1700 aa)
	ENSSGRP00000076806	Nuclear pore complex protein Nup155-like. (55 aa)
	nup205	Nuclear pore complex protein Nup205 isoform X1. (1970 aa)
	ENSSGRP00000056712	annotation not available (250 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000025381	ENSSGRP00000037365	ENSSGRP00000025381	ENSSGRP00000037365	Nuclear pore complex protein Nup205-like.	Nucleoporin 155.	0.995
ENSSGRP00000025381	ENSSGRP00000056712	ENSSGRP00000025381	ENSSGRP00000056712	Nuclear pore complex protein Nup205-like.	annotation not available	0.404
ENSSGRP00000025381	ENSSGRP00000076806	ENSSGRP00000025381	ENSSGRP00000076806	Nuclear pore complex protein Nup205-like.	Nuclear pore complex protein Nup155-like.	0.995
ENSSGRP00000025381	ENSSGRP00000092777	ENSSGRP00000025381	ENSSGRP00000092777	Nuclear pore complex protein Nup205-like.	Nuclear pore complex protein Nup188.	0.997
ENSSGRP00000025381	nup205	ENSSGRP00000025381	ENSSGRP00000067568	Nuclear pore complex protein Nup205-like.	Nuclear pore complex protein Nup205 isoform X1.	0.900
ENSSGRP00000037365	ENSSGRP00000025381	ENSSGRP00000037365	ENSSGRP00000025381	Nucleoporin 155.	Nuclear pore complex protein Nup205-like.	0.995
ENSSGRP00000037365	ENSSGRP00000056712	ENSSGRP00000037365	ENSSGRP00000056712	Nucleoporin 155.	annotation not available	0.995
ENSSGRP00000037365	ENSSGRP00000092777	ENSSGRP00000037365	ENSSGRP00000092777	Nucleoporin 155.	Nuclear pore complex protein Nup188.	0.998
ENSSGRP00000037365	nup205	ENSSGRP00000037365	ENSSGRP00000067568	Nucleoporin 155.	Nuclear pore complex protein Nup205 isoform X1.	0.995
ENSSGRP00000056712	ENSSGRP00000025381	ENSSGRP00000056712	ENSSGRP00000025381	annotation not available	Nuclear pore complex protein Nup205-like.	0.404
ENSSGRP00000056712	ENSSGRP00000037365	ENSSGRP00000056712	ENSSGRP00000037365	annotation not available	Nucleoporin 155.	0.995
ENSSGRP00000056712	ENSSGRP00000076806	ENSSGRP00000056712	ENSSGRP00000076806	annotation not available	Nuclear pore complex protein Nup155-like.	0.995
ENSSGRP00000056712	ENSSGRP00000092777	ENSSGRP00000056712	ENSSGRP00000092777	annotation not available	Nuclear pore complex protein Nup188.	0.996
ENSSGRP00000076806	ENSSGRP00000025381	ENSSGRP00000076806	ENSSGRP00000025381	Nuclear pore complex protein Nup155-like.	Nuclear pore complex protein Nup205-like.	0.995
ENSSGRP00000076806	ENSSGRP00000056712	ENSSGRP00000076806	ENSSGRP00000056712	Nuclear pore complex protein Nup155-like.	annotation not available	0.995
ENSSGRP00000076806	ENSSGRP00000092777	ENSSGRP00000076806	ENSSGRP00000092777	Nuclear pore complex protein Nup155-like.	Nuclear pore complex protein Nup188.	0.998
ENSSGRP00000076806	nup205	ENSSGRP00000076806	ENSSGRP00000067568	Nuclear pore complex protein Nup155-like.	Nuclear pore complex protein Nup205 isoform X1.	0.995
ENSSGRP00000092777	ENSSGRP00000025381	ENSSGRP00000092777	ENSSGRP00000025381	Nuclear pore complex protein Nup188.	Nuclear pore complex protein Nup205-like.	0.997
ENSSGRP00000092777	ENSSGRP00000037365	ENSSGRP00000092777	ENSSGRP00000037365	Nuclear pore complex protein Nup188.	Nucleoporin 155.	0.998
ENSSGRP00000092777	ENSSGRP00000056712	ENSSGRP00000092777	ENSSGRP00000056712	Nuclear pore complex protein Nup188.	annotation not available	0.996